Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_O15
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical pr...   116   2e-26
U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical p...    29   4.2  
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical
           protein ZK20.5 protein.
          Length = 250

 Score =  116 bits (280), Expect = 2e-26
 Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
 Frame = +3

Query: 105 QNLNPEWAKXPXKLDKCGXLLNKIKXALTQLTFLPSNNVAANQKELILA-RDVLEIGAQW 281
           +NL   WAK P  L         ++ AL +LT + S +   N K+  LA +D+ EI    
Sbjct: 6   KNLLAVWAKEPKDLVA-------VEKALNELTKVLSASSDLNDKQSALASKDLYEISVLL 58

Query: 282 AVAVKDVKAFERYMSQLKCYYFDYKDHLPESAFTNQXXXXXXXXXX-SQNRVAEFHTELE 458
           A+   D + F+ Y++Q+  YY       PE++               + NR+++FH  LE
Sbjct: 59  AILKHDFETFDDYINQMHTYY----TMAPENSENKHLMTGLHLMFLLAANRLSDFHMLLE 114

Query: 459 RLPVDVIRTDLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAA 638
           ++P     ++ YI  P+ +EQ LMEG+YNK+ L + N+P+  YT F+  +L+T+R EIA 
Sbjct: 115 QIPQKEQTSNAYISTPVRIEQSLMEGAYNKVVLTEKNIPSPFYTIFIRIMLDTIRREIAT 174

Query: 639 CIEKAYHTIPCAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILP 818
            IEK++  +   +A   L   + + + ++G++R W L  +  Y F  E       +  L 
Sbjct: 175 SIEKSFKVLTAKDATVMLLFDNDEQMKKFGQERKWHLDGER-YVFEIEVAQEKPVN--LD 231

Query: 819 SAELAXQTIEYA 854
           +  +A QT+ YA
Sbjct: 232 TVRVATQTLFYA 243


>U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical
           protein K07C11.10 protein.
          Length = 125

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 681 ARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSV-AFSGILPSAELAXQTIE 848
           A   N   ++ V+  G+K   +L  D CY F  E LT +     ++P   +  Q +E
Sbjct: 19  ATEKNEKQERVVMSQGEKLEEKLFVDECYLFQDETLTPIFCKPKLIPLKTITTQKLE 75


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
            K10C2.1 protein.
          Length = 2314

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 359  PPPGVCIHKPTVRIESIIPAFSKP-SGRVSHRT 454
            PPP V    PT  I +++P  S P SG VS  T
Sbjct: 2205 PPPSVATAGPTGPILTVVPVSSAPTSGAVSSTT 2237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,443,552
Number of Sequences: 27780
Number of extensions: 343601
Number of successful extensions: 748
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)