Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_O08
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.62 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    24   0.82 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.82 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.82 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.82 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   0.82 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   3.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.6  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 277 VRASVRGARTFRCI 318
           +R  ++GARTFRC+
Sbjct: 35  LREGLKGARTFRCV 48


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 243 TRARHLYHHIATHTGRLPF 187
           TR  HL  H+  HTG  P+
Sbjct: 20  TRDHHLKTHMRLHTGERPY 38


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 240 RARHLYHHIATHTGRLPFV 184
           +  HL  H+  HTG  PFV
Sbjct: 328 KTSHLKAHLRWHTGERPFV 346


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 581 FFFFF*KYNNILLSHLHKYNYNAVSINLIYSFNRVS*IFLNIYYINECTRSERAR 417
           FF+FF   N I       Y +NA+ +  ++ F +   ++  +Y  ++ TR  ++R
Sbjct: 246 FFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQ---LWATVYTSSQVTREVQSR 297


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 581 FFFFF*KYNNILLSHLHKYNYNAVSINLIYSFNRVS*IFLNIYYINECTRSERAR 417
           FF+FF   N I       Y +NA+ +  ++ F +   ++  +Y  ++ TR  ++R
Sbjct: 242 FFYFFTTGNIIATYDKQFYIHNALIVRALFLFFQ---LWATVYTSSQVTREVQSR 293


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 243 TRARHLYHHIATHTGRLPF 187
           TR  HL  H+  HTG  P+
Sbjct: 173 TRDHHLKTHMRLHTGERPY 191


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 246 APNLYLCICVRACLCARRP 302
           A N   C C+R C  A+RP
Sbjct: 184 ASNGNKCCCLRTCSSAKRP 202


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 241 CRLLTYICVYVCVRASVRGARTFRCIHYIY 330
           C L+  +C+Y   RA +     F C   +Y
Sbjct: 290 CALIILLCIYYFCRAFIIFPTHFYCAFSLY 319


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 231 HLYHHIATHTGRLPF 187
           HL +H+  H G  PF
Sbjct: 245 HLEYHLRNHAGSKPF 259


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 231 HLYHHIATHTGRLPF 187
           HL +H+  H G  PF
Sbjct: 3   HLEYHLRNHAGSKPF 17


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 348 KKIIGKSQKNVYSVSASSQPEATPRSLAP 434
           KK IGK+Q+     +A     A+P S  P
Sbjct: 289 KKNIGKAQEEANLYAAKKAAGASPYSGTP 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,076
Number of Sequences: 336
Number of extensions: 2447
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)