Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_O08
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ778127-1|ABH10109.1| 299|Homo sapiens BORIS transcription fac... 29 9.1
DQ778126-1|ABH10108.1| 422|Homo sapiens BORIS transcription fac... 29 9.1
DQ778125-1|ABH10107.1| 460|Homo sapiens BORIS transcription fac... 29 9.1
DQ778124-1|ABH10106.1| 403|Homo sapiens BORIS transcription fac... 29 9.1
DQ778123-1|ABH10105.1| 573|Homo sapiens BORIS transcription fac... 29 9.1
DQ778122-1|ABH10104.1| 627|Homo sapiens BORIS transcription fac... 29 9.1
DQ778115-1|ABH10097.1| 665|Homo sapiens BORIS transcription fac... 29 9.1
DQ778112-1|ABH10094.1| 613|Homo sapiens BORIS transcription fac... 29 9.1
DQ778111-1|ABH10093.1| 700|Homo sapiens BORIS transcription fac... 29 9.1
DQ778110-1|ABH10092.1| 663|Homo sapiens BORIS transcription fac... 29 9.1
DQ778109-1|ABH10091.1| 663|Homo sapiens BORIS transcription fac... 29 9.1
DQ778108-1|ABH10090.1| 663|Homo sapiens BORIS transcription fac... 29 9.1
DQ294738-1|ABB92839.1| 613|Homo sapiens BORIS-like protein prot... 29 9.1
BC130486-1|AAI30487.1| 663|Homo sapiens CCCTC-binding factor (z... 29 9.1
AY071919-1|AAL61541.1| 662|Homo sapiens zinc finger protein CTC... 29 9.1
AL160176-2|CAI42956.1| 663|Homo sapiens CCCTC-binding factor (z... 29 9.1
AF336042-1|AAM28645.1| 663|Homo sapiens nuclear DNA binding fac... 29 9.1
>DQ778127-1|ABH10109.1| 299|Homo sapiens BORIS transcription factor
transcript variant B5 protein.
Length = 299
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 237 RHMTAHIRTHTGEKPFTCLSCN 258
>DQ778126-1|ABH10108.1| 422|Homo sapiens BORIS transcription factor
transcript variant B4 protein.
Length = 422
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 294 RHMTAHIRTHTGEKPFTCLSCN 315
>DQ778125-1|ABH10107.1| 460|Homo sapiens BORIS transcription factor
transcript variant B3 protein.
Length = 460
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 294 RHMTAHIRTHTGEKPFTCLSCN 315
>DQ778124-1|ABH10106.1| 403|Homo sapiens BORIS transcription factor
transcript variant B2 protein.
Length = 403
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 237 RHMTAHIRTHTGEKPFTCLSCN 258
>DQ778123-1|ABH10105.1| 573|Homo sapiens BORIS transcription factor
transcript variant A6 protein.
Length = 573
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>DQ778122-1|ABH10104.1| 627|Homo sapiens BORIS transcription factor
transcript variant A5 protein.
Length = 627
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>DQ778115-1|ABH10097.1| 665|Homo sapiens BORIS transcription factor
transcript variant C3 protein.
Length = 665
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>DQ778112-1|ABH10094.1| 613|Homo sapiens BORIS transcription factor
transcript variant A3 protein.
Length = 613
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 449 RHMTAHIRTHTGEKPFTCLSCN 470
>DQ778111-1|ABH10093.1| 700|Homo sapiens BORIS transcription factor
transcript variant B1 protein.
Length = 700
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>DQ778110-1|ABH10092.1| 663|Homo sapiens BORIS transcription factor
transcript variant C1 protein.
Length = 663
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>DQ778109-1|ABH10091.1| 663|Homo sapiens BORIS transcription factor
transcript variant A2 protein.
Length = 663
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>DQ778108-1|ABH10090.1| 663|Homo sapiens BORIS transcription factor
transcript variant A1 protein.
Length = 663
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>DQ294738-1|ABB92839.1| 613|Homo sapiens BORIS-like protein
protein.
Length = 613
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 449 RHMTAHIRTHTGEKPFTCLSCN 470
>BC130486-1|AAI30487.1| 663|Homo sapiens CCCTC-binding factor (zinc
finger protein)-like protein.
Length = 663
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>AY071919-1|AAL61541.1| 662|Homo sapiens zinc finger protein CTCF-T
protein.
Length = 662
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>AL160176-2|CAI42956.1| 663|Homo sapiens CCCTC-binding factor (zinc
finger protein)-like protein.
Length = 663
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
>AF336042-1|AAM28645.1| 663|Homo sapiens nuclear DNA binding factor
protein.
Length = 663
Score = 29.5 bits (63), Expect = 9.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 234 RHLYHHIATHTGRLPFVPLQLN 169
RH+ HI THTG PF L N
Sbjct: 499 RHMTAHIRTHTGEKPFTCLSCN 520
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,450,098
Number of Sequences: 237096
Number of extensions: 1155861
Number of successful extensions: 3764
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3729
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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