Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_O04
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 104 6e-23
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 104 6e-23
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 75 7e-14
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 75 7e-14
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 71 9e-13
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 54 1e-07
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 54 1e-07
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 52 4e-07
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 51 8e-07
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 50 2e-06
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 48 7e-06
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 43 2e-04
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.023
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 35 0.054
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.17
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 32 0.38
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 32 0.38
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 32 0.38
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 32 0.38
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.67
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 29 2.7
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.6
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 29 3.6
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 29 4.7
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 29 4.7
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 104 bits (250), Expect = 6e-23
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 110 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX--FLPIYSQ 283
F++YD E GKID +GD+ RA PT A + +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 284 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 463
K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGV---E 129
Query: 464 DDDGMIPYAAFLKKVMA 514
D +GM+ Y F+KKV+A
Sbjct: 130 DGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 104 bits (250), Expect = 6e-23
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +2
Query: 110 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX--FLPIYSQ 283
F++YD E GKID +GD+ RA PT A + +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 284 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 463
K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGV---E 129
Query: 464 DDDGMIPYAAFLKKVMA 514
D +GM+ Y F+KKV+A
Sbjct: 130 DGEGMVKYEDFIKKVLA 146
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +2
Query: 65 MSD-LSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 241
M+D L+ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 242 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 418
FL + A+K KD + E+ E +++DK+ NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 419 DSEVAEVTKDCMDPEDDDGMIPYAAFL 499
D EV E+ ++ D DG + Y F+
Sbjct: 119 DEEVDEMIREA--DIDGDGQVNYEEFV 143
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 74.5 bits (175), Expect = 7e-14
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +2
Query: 65 MSD-LSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 241
M+D L+ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 242 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 418
FL + A+K KD + E+ E +++DK+ NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 419 DSEVAEVTKDCMDPEDDDGMIPYAAFL 499
D EV E+ ++ D DG + Y F+
Sbjct: 119 DEEVDEMIREA--DIDGDGQVNYEEFV 143
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 74.1 bits (174), Expect = 1e-13
Identities = 43/134 (32%), Positives = 68/134 (50%)
Frame = +2
Query: 110 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 289
F+ +D +G +I +GD+LRAL NPT A I F+PI+
Sbjct: 11 FAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFED-FVPIFQSVS 69
Query: 290 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 469
K++++ E+F+E L +DK NG++ AEL H L LGE+L D +V ++ D
Sbjct: 70 KNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLS---GHNDS 126
Query: 470 DGMIPYAAFLKKVM 511
G + + F++ VM
Sbjct: 127 HGNVNISDFVRAVM 140
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 70.9 bits (166), Expect = 9e-13
Identities = 41/142 (28%), Positives = 70/142 (49%)
Frame = +2
Query: 86 DVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXF 265
++E F ++D +G GKIDA + ++LR+L+ NP + + F
Sbjct: 6 NMEECREVFMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDVHQCLAKFDKTARISFEN-F 64
Query: 266 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 445
LP+ S + +K + EDF++ L +DK G + AEL L +G+KL D E ++
Sbjct: 65 LPVLSHVRNNKIPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVA 124
Query: 446 DCMDPEDDDGMIPYAAFLKKVM 511
++D+G I F+K +M
Sbjct: 125 G----QEDNGKIKIETFVKTIM 142
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +2
Query: 65 MSDLSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXX 241
+ L+ +++ AF ++D +G G I LG +R+L NPT I
Sbjct: 72 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGN 131
Query: 242 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 421
F + + K+ D E E +++DK+ NG++ E + ++ +G + +
Sbjct: 132 GQIEFPEFCVMMKRMMKETDS---EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 188
Query: 422 SEVAEVTKDCMDPEDDDGMIPYAAFLK 502
EV E+ K+ D DG I Y F+K
Sbjct: 189 EEVDEMIKEV--DVDGDGEIDYEEFVK 213
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +2
Query: 65 MSDLSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXX 241
+ L+ +++ AF ++D +G G I LG +R+L NPT I
Sbjct: 15 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGN 74
Query: 242 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 421
F + + K+ D E E +++DK+ NG++ E + ++ +G + +
Sbjct: 75 GQIEFPEFCVMMKRMMKETDS---EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 131
Query: 422 SEVAEVTKDCMDPEDDDGMIPYAAFLK 502
EV E+ K+ D DG I Y F+K
Sbjct: 132 EEVDEMIKEV--DVDGDGEIDYEEFVK 156
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Frame = +2
Query: 35 RVGNRQTPHKMSD---LSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LA 202
R ++QT +S L+ ++ AF ++D +G G I + LG +R+L NPT
Sbjct: 13 RWASKQTNEPVSGFDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQE 72
Query: 203 TIXXXXXXXXXXXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 382
+ F + + K+ D E E +++D++ NG + E
Sbjct: 73 LLDMVNEVDIDGSGTIDFGEFCQMMKRMNKENDS---EMIREAFRVFDRDGNGFITADEF 129
Query: 383 THTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 496
+ + +G++ D EV E+ + D DG I Y F
Sbjct: 130 RYFMTHMGDQFSDQEVDEIIAEI--DIDGDGQIDYEEF 165
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Frame = +2
Query: 35 RVGNRQTPHKMSD---LSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LA 202
R ++QT +S L+ ++ AF ++D +G G I + LG +R+L NPT
Sbjct: 13 RWASKQTNEPVSGFDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQE 72
Query: 203 TIXXXXXXXXXXXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAEL 382
+ F + + K+ D E E +++D++ NG + E
Sbjct: 73 LLDMVNEVDIDGSGTIDFGEFCQMMKRMNKENDS---EMIREAFRVFDRDGNGFITADEF 129
Query: 383 THTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 496
+ + +G++ D EV E+ + D DG I Y F
Sbjct: 130 RYFMTHMGDQFSDQEVDEIIAEI--DIDGDGQIDYEEF 165
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 284 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 463
A+K K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 80
Query: 464 DDDGMIPYAAF 496
D DG I +F
Sbjct: 81 DGDGQIMRVSF 91
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Frame = +2
Query: 65 MSDLSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXX 241
+S L+ ++ AF ++D +G G I LG +RAL NPT +
Sbjct: 20 ISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGN 79
Query: 242 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 421
F + + K+ D E E K++D++ NG++ E ++ +G D+
Sbjct: 80 GQVEFPEFCVMMKRIMKETDS---EMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDE 136
Query: 422 SEVAEVTK--DCMDPEDDDGMIPYAAFLK 502
EV E+ DC D +G I Y F+K
Sbjct: 137 VEVEEMMNEVDC----DGNGEIDYEEFVK 161
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Frame = +2
Query: 44 NRQTPHKMSDLSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXX 223
N+ + + +++ + AF ++D +G ++ LG+ +R L NPT +
Sbjct: 7 NQSVCSDADEFTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVN 66
Query: 224 XXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLA 400
F + + K+ DQ E K++DK+ NG + E H +
Sbjct: 67 EYDVDGNGKIDFGEFCKMMKEMNKETDQ---ELIRLAFKVFDKDGNGYITAQEFKHFMTT 123
Query: 401 LGEKLDDSEVAEVTKDCMDPEDDD 472
+GE+ + EV E+ ++ +D + D+
Sbjct: 124 MGERFSEEEVDEIIRE-VDKDGDE 146
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 48.0 bits (109), Expect = 7e-06
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Frame = +2
Query: 65 MSDLSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATIXXXXXXXXX 235
+ LS +E+ F+++D EGKG I A +G +LR + L +
Sbjct: 9 LEKLSADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGS 68
Query: 236 XXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 415
+ + D+G E+ E +LYDK NG + ++L L AL + +
Sbjct: 69 GEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNV 128
Query: 416 DDSEVAEVTKDCMDPEDDDGMIPYAAFLK 502
+ E+ E+ + D G + + F++
Sbjct: 129 SEEELDEMIAEI--DADGSGTVDFDEFME 155
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 48.0 bits (109), Expect = 7e-06
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Frame = +2
Query: 65 MSDLSXXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATIXXXXXXXXX 235
+ LS +E+ F+++D EGKG I A +G +LR + L +
Sbjct: 9 LEKLSADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGS 68
Query: 236 XXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 415
+ + D+G E+ E +LYDK NG + ++L L AL + +
Sbjct: 69 GEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNV 128
Query: 416 DDSEVAEVTKDCMDPEDDDGMIPYAAFLK 502
+ E+ E+ + D G + + F++
Sbjct: 129 SEEELDEMIAEI--DADGSGTVDFDEFME 155
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 110 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 289
F +D G GKID+ L LRA+ NPT A + F+PIY + +
Sbjct: 14 FHFHDTLGDGKIDSKQLPTALRAMMLNPTEA-LLAEVSKARTSGARITVEEFIPIYKKVE 72
Query: 290 KDKDQG-AYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 430
+ ++F L +D+ NG ++ EL L GEK+ + EV
Sbjct: 73 AACGRSTTLKEFQTLLSHFDREGNGQIMLMELKSMLQNGGEKMTNQEV 120
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 326 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 499
+ ++DKN +G++ +L + LGEKL ++E E+ K D DGMI + F+
Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIK--QGDLDHDGMIDFQEFV 139
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 326 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 499
E + +DKN +G + EL LL LGEK +S++ + + D +G I FL
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQA--DLDGNGCIDIDEFL 66
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 110 FSIYDFEGKGKIDAFNLGDLLRALNSNPT--LATIXXXXXXXXXXXXXXXXXXFLPIYSQ 283
F++YD E GKID +GD+ RA PT + T +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 284 AKKDK 298
K+K
Sbjct: 73 LAKEK 77
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 338 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 502
+YDKN++G + G ELT LL G E + + D D DG + Y +K
Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDD--DKDGQLSYEEIVK 275
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 299 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 460
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 299 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 460
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 299 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 460
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 299 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 460
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 326 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKK 505
EC ++D++ENG + + L LG+ D+ + E+ + D +G+I Y F
Sbjct: 134 ECFTVFDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEA--DVDGNGVIDYDEFTYM 191
Query: 506 VMAXKTSQLVI 538
V T ++
Sbjct: 192 VKNYMTDDDIV 202
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 129 KAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRE 308
K ++ P+ L +R TP PSRNS +Q+ A K+ + +++ + T+
Sbjct: 319 KQPSQKKPADLTPHPKRPPITPETLPSRNSEIQKPAASKIQEKKTEVIARSQKSEASTKI 378
Query: 309 RMKIS 323
K S
Sbjct: 379 AQKPS 383
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.6
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 96 GRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKS--SF 269
GR S+S+ ++++RS P T + S RS+ R+S RRR+R S SK+
Sbjct: 121 GRTGRSRSSK-RSRSRSRPRTRSGS--RSSSRSRSGSRRSS---RRRSRHRSSSKARGRR 174
Query: 270 PSTAKQRKTKTRERMKISWNV*SCMTR 350
STAK+ K R R + V M+R
Sbjct: 175 ASTAKKTPAKRRSRSRSQQKVKRSMSR 201
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.6
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 96 GRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKS--SF 269
GR S+S+ ++++RS P T + S RS+ R+S RRR+R S SK+
Sbjct: 121 GRTGRSRSSK-RSRSRSRPRTRSGS--RSSSRSRSGSRRSS---RRRSRRRSSSKARGRR 174
Query: 270 PSTAKQRKTKTRERMKISWNV*SCMTR 350
STAK+ K R R + V M+R
Sbjct: 175 ASTAKKTPAKRRSRSRSQQKVKRSMSR 201
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 95 RASFAFSIYDFEGKGKID 148
RA FAF + D EGKG++D
Sbjct: 189 RAQFAFQLMDEEGKGRVD 206
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 56 PHKMSDLSXXDVERASFAFSIYDFEGK 136
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 56 PHKMSDLSXXDVERASFAFSIYDFEGK 136
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 669 LRAPPEELSPPRALPAPVPQSRASV 595
LRAP EE PP A APVP ++
Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,671,243
Number of Sequences: 27780
Number of extensions: 265082
Number of successful extensions: 1049
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -