Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_O02
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0786 - 20540061-20542106                                         30   2.6  
06_03_0592 + 22585546-22588573,22588680-22589032                       30   2.6  
12_01_0015 - 111666-111747,112043-112368,112500-112635,112772-11...    28   7.9  
11_01_0015 - 115965-116076,116432-116757,116889-117024,117161-11...    28   7.9  

>10_08_0786 - 20540061-20542106
          Length = 681

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 389 CTISRNTGMFASISGWVASSGSLQKLVSTDNATDLYTDGG 270
           CT +RN  M AS+ G +   G    +V+  +  D+Y   G
Sbjct: 219 CTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNG 258


>06_03_0592 + 22585546-22588573,22588680-22589032
          Length = 1126

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 25/89 (28%), Positives = 41/89 (46%)
 Frame = +1

Query: 97  SS*KMQXATPKNLLPCFMVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPP 276
           SS   Q A P +L  C  +  +  S++       + F  +  +    +LTSN + D+ PP
Sbjct: 155 SSNSFQGAIPASLGKCIHLQDINLSRNNLQGRISSAFGNLS-KLQALVLTSNRLTDEIPP 213

Query: 277 SVYKSVALSVLTNFCNEPELATHPEMLAN 363
           S+  S +L  + +  N     + PE LAN
Sbjct: 214 SLGSSFSLRYV-DLGNNDITGSIPESLAN 241


>12_01_0015 -
           111666-111747,112043-112368,112500-112635,112772-112955,
           113067-113135,113703-113829,115810-116051,116125-116279,
           116751-116822,116908-116976,117058-117129,117217-117349,
           117439-117944,118033-118567,118753-118819
          Length = 924

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
 Frame = +1

Query: 502 GAIKKMSEIYSHQSFQT-DEALNILVKLVSRYGPAAW---GSDP 621
           G I    EIY +       +  NI+  LVSRY  A W   G DP
Sbjct: 349 GPILNAMEIYKYIEISVGSQDANIMASLVSRYPEAGWAQEGGDP 392


>11_01_0015 -
           115965-116076,116432-116757,116889-117024,117161-117344,
           117455-117523,118091-118217,120028-120269,120343-120497,
           120969-121040,121126-121194,121276-121347,121435-121567,
           121661-122166,122255-122789,122943-123018
          Length = 937

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
 Frame = +1

Query: 502 GAIKKMSEIYSHQSFQT-DEALNILVKLVSRYGPAAW---GSDP 621
           G I    EIY +       +  NI+  LVSRY  A W   G DP
Sbjct: 352 GPILNAMEIYKYIEISVGSQDANIMASLVSRYPEAGWAQEGGDP 395


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,771,940
Number of Sequences: 37544
Number of extensions: 404613
Number of successful extensions: 857
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)