Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_O02
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024592-1|AAH24592.1| 729|Homo sapiens neurochondrin protein. 113 7e-25
AC004865-1|AAD05029.1| 730|Homo sapiens unknown protein. 113 7e-25
AB027514-2|BAA77831.1| 712|Homo sapiens neurochondrin-2 protein. 113 7e-25
AB027514-1|BAA77830.1| 729|Homo sapiens neurochondrin-1 protein. 113 7e-25
AB018740-1|BAA85385.2| 712|Homo sapiens neurochondrin-2 protein. 113 7e-25
AB018739-1|BAA85384.2| 729|Homo sapiens neurochondrin-1 protein. 113 7e-25
AB011179-1|BAA25533.1| 731|Homo sapiens KIAA0607 protein protein. 113 7e-25
AF235654-1|AAK13784.1| 62|Homo sapiens immunoglobulin heavy ch... 31 5.1
BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein. 30 8.9
>BC024592-1|AAH24592.1| 729|Homo sapiens neurochondrin protein.
Length = 729
Score = 113 bits (272), Expect = 7e-25
Identities = 57/191 (29%), Positives = 97/191 (50%)
Frame = +1
Query: 148 MVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNE 327
+VTK VK+ D ++ ++ +F+A+GF F +LLT+ D CP V +++ +++L FC++
Sbjct: 58 LVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSD 117
Query: 328 PELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVGA 507
PELA HP++L IP+ + +I + Y CL +A G R LI G
Sbjct: 118 PELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGT 177
Query: 508 IKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERK 687
+ + + Y + D+AL +LV L++ W A++ ++ DF + K
Sbjct: 178 VSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 237
Query: 688 FELXTVLSALL 720
FEL +L L
Sbjct: 238 FELCQLLPLFL 248
>AC004865-1|AAD05029.1| 730|Homo sapiens unknown protein.
Length = 730
Score = 113 bits (272), Expect = 7e-25
Identities = 57/191 (29%), Positives = 97/191 (50%)
Frame = +1
Query: 148 MVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNE 327
+VTK VK+ D ++ ++ +F+A+GF F +LLT+ D CP V +++ +++L FC++
Sbjct: 59 LVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSD 118
Query: 328 PELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVGA 507
PELA HP++L IP+ + +I + Y CL +A G R LI G
Sbjct: 119 PELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGT 178
Query: 508 IKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERK 687
+ + + Y + D+AL +LV L++ W A++ ++ DF + K
Sbjct: 179 VSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 238
Query: 688 FELXTVLSALL 720
FEL +L L
Sbjct: 239 FELCQLLPLFL 249
>AB027514-2|BAA77831.1| 712|Homo sapiens neurochondrin-2 protein.
Length = 712
Score = 113 bits (272), Expect = 7e-25
Identities = 57/191 (29%), Positives = 97/191 (50%)
Frame = +1
Query: 148 MVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNE 327
+VTK VK+ D ++ ++ +F+A+GF F +LLT+ D CP V +++ +++L FC++
Sbjct: 41 LVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSD 100
Query: 328 PELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVGA 507
PELA HP++L IP+ + +I + Y CL +A G R LI G
Sbjct: 101 PELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGT 160
Query: 508 IKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERK 687
+ + + Y + D+AL +LV L++ W A++ ++ DF + K
Sbjct: 161 VSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 220
Query: 688 FELXTVLSALL 720
FEL +L L
Sbjct: 221 FELCQLLPLFL 231
>AB027514-1|BAA77830.1| 729|Homo sapiens neurochondrin-1 protein.
Length = 729
Score = 113 bits (272), Expect = 7e-25
Identities = 57/191 (29%), Positives = 97/191 (50%)
Frame = +1
Query: 148 MVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNE 327
+VTK VK+ D ++ ++ +F+A+GF F +LLT+ D CP V +++ +++L FC++
Sbjct: 58 LVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSD 117
Query: 328 PELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVGA 507
PELA HP++L IP+ + +I + Y CL +A G R LI G
Sbjct: 118 PELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGT 177
Query: 508 IKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERK 687
+ + + Y + D+AL +LV L++ W A++ ++ DF + K
Sbjct: 178 VSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 237
Query: 688 FELXTVLSALL 720
FEL +L L
Sbjct: 238 FELCQLLPLFL 248
>AB018740-1|BAA85385.2| 712|Homo sapiens neurochondrin-2 protein.
Length = 712
Score = 113 bits (272), Expect = 7e-25
Identities = 57/191 (29%), Positives = 97/191 (50%)
Frame = +1
Query: 148 MVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNE 327
+VTK VK+ D ++ ++ +F+A+GF F +LLT+ D CP V +++ +++L FC++
Sbjct: 41 LVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSD 100
Query: 328 PELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVGA 507
PELA HP++L IP+ + +I + Y CL +A G R LI G
Sbjct: 101 PELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGT 160
Query: 508 IKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERK 687
+ + + Y + D+AL +LV L++ W A++ ++ DF + K
Sbjct: 161 VSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 220
Query: 688 FELXTVLSALL 720
FEL +L L
Sbjct: 221 FELCQLLPLFL 231
>AB018739-1|BAA85384.2| 729|Homo sapiens neurochondrin-1 protein.
Length = 729
Score = 113 bits (272), Expect = 7e-25
Identities = 57/191 (29%), Positives = 97/191 (50%)
Frame = +1
Query: 148 MVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNE 327
+VTK VK+ D ++ ++ +F+A+GF F +LLT+ D CP V +++ +++L FC++
Sbjct: 58 LVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSD 117
Query: 328 PELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVGA 507
PELA HP++L IP+ + +I + Y CL +A G R LI G
Sbjct: 118 PELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGT 177
Query: 508 IKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERK 687
+ + + Y + D+AL +LV L++ W A++ ++ DF + K
Sbjct: 178 VSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 237
Query: 688 FELXTVLSALL 720
FEL +L L
Sbjct: 238 FELCQLLPLFL 248
>AB011179-1|BAA25533.1| 731|Homo sapiens KIAA0607 protein protein.
Length = 731
Score = 113 bits (272), Expect = 7e-25
Identities = 57/191 (29%), Positives = 97/191 (50%)
Frame = +1
Query: 148 MVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCNE 327
+VTK VK+ D ++ ++ +F+A+GF F +LLT+ D CP V +++ +++L FC++
Sbjct: 60 LVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSD 119
Query: 328 PELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVGA 507
PELA HP++L IP+ + +I + Y CL +A G R LI G
Sbjct: 120 PELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGT 179
Query: 508 IKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSERK 687
+ + + Y + D+AL +LV L++ W A++ ++ DF + K
Sbjct: 180 VSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 239
Query: 688 FELXTVLSALL 720
FEL +L L
Sbjct: 240 FELCQLLPLFL 250
>AF235654-1|AAK13784.1| 62|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 62
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 649 IALDFATDQSERKFELXTVLSALLYSCNKSTVLPGSSXETWPQ 777
I++D + +Q K T +Y C KS+ PGS + W Q
Sbjct: 20 ISVDTSKNQFSLKLSSVTAADTAVYYCAKSSSRPGSPMDVWGQ 62
>BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein.
Length = 1884
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 48 VLVTMGDVSEPIKKCILILKNAXSDTEK 131
+L D +P+ CIL+L A SDTE+
Sbjct: 380 ILQGYADTEDPLGNCILLLSKASSDTEE 407
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,695,150
Number of Sequences: 237096
Number of extensions: 2412587
Number of successful extensions: 4017
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4017
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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