BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_O02
(829 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-469|AAF54119.1| 723|Drosophila melanogaster CG2330-PA ... 267 1e-71
AY094654-1|AAM11007.1| 919|Drosophila melanogaster AT12613p pro... 32 0.83
AE014134-762|AAF50990.2| 919|Drosophila melanogaster CG11929-PA... 32 0.83
>AE014297-469|AAF54119.1| 723|Drosophila melanogaster CG2330-PA
protein.
Length = 723
Score = 267 bits (654), Expect = 1e-71
Identities = 124/226 (54%), Positives = 162/226 (71%)
Frame = +1
Query: 145 FMVTKLVKSKDCNSTAKKALFEAIGFQFLKKLLTSNSVEDDCPPSVYKSVALSVLTNFCN 324
FMVTKLVK KDCN+ KK LFEAIGF FLKKLL S + +DCPP VYKSVALS+LT FC
Sbjct: 29 FMVTKLVKGKDCNAAGKKLLFEAIGFPFLKKLLVSKDLPNDCPPLVYKSVALSILTCFCQ 88
Query: 325 EPELATHPEMLANIPVFLDIVQTSXXXXXXXXLIIISEAYTCLQCIAEHEAGQRALIDVG 504
E ELATH +++ IP L+IV+ + LI++SEAY+CL+ IA HE GQ+AL+ G
Sbjct: 89 EEELATHKDIIDAIPTLLEIVEQADDEDYEDNLIVVSEAYSCLKSIASHEPGQQALLATG 148
Query: 505 AIKKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGSDPKPFHALVNKIALDFATDQSER 684
AI KMS+IYS QSFQTDEAL+++V LV ++G +W DP FHAL+ +IALD TD +ER
Sbjct: 149 AIPKMSQIYSAQSFQTDEALHLIVLLVKQFGVVSWPEDPTAFHALIQRIALDMETDDTER 208
Query: 685 KFELXTVLSALLYSCNKSTVLPGSSXETWPQSIYXALHDILTSKIG 822
K+EL +L+ +L +C + V+ + WP+S++ DIL +KIG
Sbjct: 209 KYELCRILADILITCRREIVINSLEGQIWPESLFKGCGDILKAKIG 254
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3
Query: 60 MGDVSEPIKKCILILKNAXSDTEKFAAL 143
M DV EP++KC +LK SDTEKFAAL
Sbjct: 1 MTDVPEPVRKCASLLKGTKSDTEKFAAL 28
>AY094654-1|AAM11007.1| 919|Drosophila melanogaster AT12613p
protein.
Length = 919
Score = 32.3 bits (70), Expect = 0.83
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Frame = +1
Query: 91 AYSS*KMQXATPKNLLPCF---MVTKLVKSKDC-NSTAKKALFEAIGF-----QFLKKLL 243
A SS + + K L F +++ KSK C N+ A+ A E+ F +F+K
Sbjct: 576 AKSSEQSNKSVEKELYKSFIEQLISHFTKSKSCENNQAQNAQSESYSFDRLLPEFVKMFT 635
Query: 244 TSNSVEDDCPPSVYKSVALSVL 309
SNS+E+D P V S ++L
Sbjct: 636 RSNSLEEDRPKKVSISEKKTIL 657
>AE014134-762|AAF50990.2| 919|Drosophila melanogaster CG11929-PA
protein.
Length = 919
Score = 32.3 bits (70), Expect = 0.83
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Frame = +1
Query: 91 AYSS*KMQXATPKNLLPCF---MVTKLVKSKDC-NSTAKKALFEAIGF-----QFLKKLL 243
A SS + + K L F +++ KSK C N+ A+ A E+ F +F+K
Sbjct: 576 AKSSEQSNKSVEKELYKSFIEQLISHFTKSKSCENNQAQNAQSESYSFDRLLPEFVKMFT 635
Query: 244 TSNSVEDDCPPSVYKSVALSVL 309
SNS+E+D P V S ++L
Sbjct: 636 RSNSLEEDRPKKVSISEKKTIL 657
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,270,431
Number of Sequences: 53049
Number of extensions: 720141
Number of successful extensions: 1415
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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