Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_N21
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0648 - 30844289-30844341,30844536-30844648,30845435-308454... 100 3e-21
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 95 5e-20
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 90 2e-18
01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079... 66 3e-11
03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,583... 57 2e-08
01_06_0459 + 29538025-29538579,29539190-29539354,29539448-295395... 44 2e-04
04_01_0310 + 4197835-4197875,4197994-4198924 30 2.7
03_05_1146 - 30735010-30735216,30735336-30735650,30740169-307401... 30 2.7
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 29 3.5
12_02_0312 + 17395716-17398112 29 4.7
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 29 6.2
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 28 8.1
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 28 8.1
>01_06_0648 -
30844289-30844341,30844536-30844648,30845435-30845484,
30845572-30845642,30845725-30845797,30846744-30846841,
30846936-30847002,30847150-30847230,30847312-30847479,
30847563-30847730,30847813-30848109,30848205-30848426,
30849287-30849325
Length = 499
Score = 99.5 bits (237), Expect = 3e-21
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 4/218 (1%)
Frame = +2
Query: 203 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQ 382
+ LPN +A+ + SP V + GS YE A G SH+L A +T N S +
Sbjct: 73 TTLPNGIKIASETSVSPAASVGLYIDCGSIYETPASSGASHLLERMAFKSTTNRSHLRLV 132
Query: 383 RKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 562
R++ IG VSAS RE + YT +A + + + +E+L + V N F WE+ + ++K
Sbjct: 133 REVEAIGGNVSASASREQMCYTYDAFKAYVPEMVEVLIDSVRNPAFFNWEIKEQLEKIKA 192
Query: 563 DI--ISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPXRCAV 736
+I +S PQ ++ LH A Y L L I+ + S L+ F ++N T R +
Sbjct: 193 EIAEVSDNPQGLLLEALHSAGYSGALAKPLMAPQSAIHRLDSSILEEFIAENYTAPRMVL 252
Query: 737 TVIGDSQERAALIVQNL--KLTSSDASQAEXSTYYGGE 844
G + I + L L S + S Y GG+
Sbjct: 253 AASGVEHDELVSIAEPLLSDLPSVKRPEEPKSVYVGGD 290
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 95.5 bits (227), Expect = 5e-20
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
Frame = +2
Query: 203 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQ 382
+ LPN +A+ + P V + GS YE + G SH+L A +T N S +
Sbjct: 125 TTLPNGIKIASETSPIPAVSVGLYIDCGSVYETSSSSGTSHLLERMAFKSTTNRSHLRLV 184
Query: 383 RKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 562
R++ IG V AS RE + YT +A + + +E+L + V N F WE+ + ++K
Sbjct: 185 REVEAIGGNVFASASREQMSYTYDALKCYAPEMVEVLIDSVRNPAFLEWEVKEQLQKIKS 244
Query: 563 DI--ISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPXRCAV 736
+I +S P ++ LH A Y L L S +N + +L+ F S+N T R +
Sbjct: 245 EISEVSGDPHGLLMEALHSAGYSGALAKPLMASESAVNRLDVATLEEFVSENYTAPRMVL 304
Query: 737 TVIGDSQERAALIVQNL--KLTSSDASQAEXSTYYGGE 844
G + + + L L S + S Y GG+
Sbjct: 305 AASGIEHDELVSVAEPLLSDLPSVKRPEEPKSVYVGGD 342
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 90.2 bits (214), Expect = 2e-18
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Frame = +2
Query: 170 PAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGL 349
P + + + + + L N +A+ P V + GS +E LG + +L+ A
Sbjct: 69 PDLVEPGKTKITTLANGVKIASETTPGPSCSVGVYVNCGSVHEAPETLGATQLLKKMAYT 128
Query: 350 TTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQEFRPW 529
TT N S + R++ +G V AS +RE++ Y+ A + + + +E+L + V N F W
Sbjct: 129 TTTNRSHLRVVREIEAVGGNVKASANREMMSYSYAALKTYMPEMVEVLIDCVRNPAFLDW 188
Query: 530 ELNDNAPRLKYDI--ISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFA 703
E+ + +LK ++ S P+ ++ LH Y L L S ++ +++ L+ F
Sbjct: 189 EVKEQIMKLKAELAEASSNPETFLLEALHSTGYSGALATPLIASESSVSRLNTNVLEYFL 248
Query: 704 SQNITPXRCAVTVIGDSQERAALIVQNL--KLTSSDASQAEXSTYYGGE 844
++N T R + G + I + L + STY GGE
Sbjct: 249 AENYTAPRIVLAATGVDHDELVSIAEPLLSDMPGVTGPAKPKSTYVGGE 297
>01_07_0301 +
42607239-42607277,42607374-42607577,42607669-42607965,
42608055-42608222,42608393-42608560,42608653-42608733,
42608844-42608910,42609326-42609423,42609665-42609737,
42609826-42609896,42610013-42610062,42610145-42610257,
42610341-42610384
Length = 490
Score = 66.5 bits (155), Expect = 3e-11
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Frame = +2
Query: 203 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQ 382
+ LPN VA+ D P V + +GS YE G+SH+L + T + S I
Sbjct: 67 TTLPNGVRVASEDLPGPSACVGVFVDSGSVYETAETAGVSHLLERLSFKDTAHRSHLQIV 126
Query: 383 RKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 562
+ + G + AS RE Y+ E + L A+E+L + V N F E+ +
Sbjct: 127 QDVEATGGNIGASASREQTVYSYETLKAYLPQAIEVLIDCVRNPLFLQDEVERQVAFARE 186
Query: 563 DIISLP--PQIRAVDLLHKAAYRRGLGNSLFISPKRINDISSESLQLFASQNITPXRCAV 736
++ L P+ + L+ Y L N L + + I+ +Q F +N T R V
Sbjct: 187 EVQELQKNPERFLQESLNLVGYTGALANPLVAPEESLTRINGSIIQKFYHENFTADRLVV 246
Query: 737 TVIGDSQERAALIVQNLKLTSSDASQAE--XSTYYGGE 844
G + + + L S E S Y GG+
Sbjct: 247 AASGVDHQYLLDVAEPLLSDWHKGSPVERPESKYIGGD 284
>03_02_0138 +
5837813-5838490,5839000-5839164,5839289-5839426,
5839496-5839647,5839754-5839862,5840551-5840649,
5840739-5840804,5840891-5840998,5841820-5841906
Length = 533
Score = 56.8 bits (131), Expect = 2e-08
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 4/186 (2%)
Frame = +2
Query: 203 SVLPNKTFVAALDN-GSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLI 379
+ LPN VA + S V + AGSRYE + G++H + T + ++ +
Sbjct: 102 TTLPNGLRVATESSLASRTATVGVWIDAGSRYETEDSAGVAHFVEHMLFKGTGDRNAAQL 161
Query: 380 QRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLK 559
+ ++ IG +++A RE Y + + AL IL +++ + + + +
Sbjct: 162 EEEIENIGGHLNAYTSREQTTYYAKVLDKDVPRALNILADILQHSKLEESRIERERDVIL 221
Query: 560 YDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKRINDISSESLQLFASQNITPXRC 730
++ + Q V D LH A++ LG + S + + I+ E LQ + + T R
Sbjct: 222 REMEEVEGQYEEVIFDHLHATAFQYTSLGRPILGSAENVKSITQEDLQKYIETHYTAPRM 281
Query: 731 AVTVIG 748
+T G
Sbjct: 282 VITAAG 287
>01_06_0459 +
29538025-29538579,29539190-29539354,29539448-29539585,
29539685-29539836,29539949-29540057,29540281-29540379,
29541051-29541116,29541208-29541315,29541428-29541553
Length = 505
Score = 43.6 bits (98), Expect = 2e-04
Identities = 46/213 (21%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Frame = +2
Query: 128 FIRHVT-IRGYAQAAPAVK-KDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEP 301
F+RH + + +P ++ D R+ + + A + + V + AGSR+E
Sbjct: 34 FLRHASPVPRDPDHSPFLRLPDARVSTLPTGLRIVTQAYPAATRMASVGVWVDAGSRFEL 93
Query: 302 QAELGLSHVLRSAAGL-TTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLND 478
G +H L A TT+ ++ ++ ++ +GA ++A RE Y + +
Sbjct: 94 PGTNGTAHFLEHMAFKGTTRRPTANALEVEIENMGARLNAYTSREQTTYFADVQGRDVPI 153
Query: 479 ALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR-RGLGNSLF 649
AL++L++++ F L + ++ + + V D LH AA++ LG+++
Sbjct: 154 ALDVLSDILQYPCFPANALQRERGVILREMEEVQGMMDEVIFDHLHAAAFQGHPLGDTIL 213
Query: 650 ISPKRINDISSESLQLFASQNITPXRCAVTVIG 748
+ I IS + L+ + + + T R V+ G
Sbjct: 214 GPVENIKSISKKDLEQYITTHYTCPRMVVSAAG 246
>04_01_0310 + 4197835-4197875,4197994-4198924
Length = 323
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +2
Query: 392 SQIGAYVSASGDRELIYYTLEATQDKLND----ALEILNNLVSNQEFRPWELNDNAPRLK 559
SQ + D E LE +KL++ A+++ + +S E+R WEL+ +L
Sbjct: 27 SQNTTLSNEKNDLERRVKRLEYENNKLSNEKRWAVDVYSRKISTLEYRVWELDHQNNKLS 86
Query: 560 YDIISLPPQIRAVDLLHKAAYRR 628
+++ R V LL A R
Sbjct: 87 SELVRQTEDTRTVGLLFMNAADR 109
>03_05_1146 -
30735010-30735216,30735336-30735650,30740169-30740191,
30740591-30740666,30740764-30740889,30740968-30741033,
30741296-30741539,30741639-30741691
Length = 369
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 730 CCYCNW*FSGKGCIDCSK-PKIDL-IGCFS 813
C YCN SGK I CSK P DL + CFS
Sbjct: 53 CNYCNKDISGKIRIKCSKCPDFDLCVECFS 82
>01_05_0343 +
21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 263 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSA 418
+++A K GS E + E G++H++ A T ++ I + L IGA A
Sbjct: 80 LSLAVKVGSVVEEEDERGVAHIVEHLAFSATSRYTNHDIVKFLESIGAEFGA 131
>12_02_0312 + 17395716-17398112
Length = 798
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +2
Query: 326 VLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLV 505
+++S +G + K ++ +Q+KL ++ SGD+ + + + D +ND E++N L
Sbjct: 238 IIQSDSGESNKQLTLEALQKKLHEL------SGDKRYLLVLDDISHDNINDWEELMNLLP 291
Query: 506 SNQ 514
S +
Sbjct: 292 SGR 294
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 371 FLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNA 547
F I ++Q+GA VSA R++ + +E D L + + +SN P E +NA
Sbjct: 506 FAIFNSVNQLGAKVSAVQGRDVTKHLIEIWLDLLRSMMTEVEWRISNYVPTPEEYMENA 564
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/105 (21%), Positives = 47/105 (44%)
Frame = +2
Query: 449 LEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAVDLLHKAAYRR 628
L+A KL+ +L++ + N E E+N + P+ + +S A L
Sbjct: 128 LKALAGKLDSSLKMKGKVTYNGE----EVNSSTPQYLHAYVSQYDLHHAEMTLSSLKKLI 183
Query: 629 GLGNSLFISPKRINDISSESLQLFASQNITPXRCAVTVIGDSQER 763
G++L+ + N + +++++ Q + CA T++GD R
Sbjct: 184 CTGHNLWRRKQPYNKLYYQAIKIECMQILGLSECADTLVGDEMRR 228
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 104 ASKTLVAPFIRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDN 244
A + + P IRH+ ++ +++ AV R Q S+ P+K V+ L +
Sbjct: 673 ARRVSLTPVIRHIPLQPKRRSSLAVLPTQREQLSIFPDKRSVSRLSH 719
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,360,183
Number of Sequences: 37544
Number of extensions: 433676
Number of successful extensions: 894
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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