Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_N14
(721 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 36 0.043
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 31 0.70
05_04_0286 + 19833114-19834053,19834149-19834165 31 0.92
07_03_1177 - 24574682-24574852,24575047-24575618,24575711-245760... 30 1.6
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 30 1.6
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213... 30 2.1
05_02_0160 - 7194699-7195019,7195207-7195368,7195806-7195953,719... 30 2.1
11_05_0030 - 18487272-18487544 29 2.8
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 29 3.7
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 29 4.9
06_03_0750 - 24140988-24141037,24141108-24141345,24142158-241422... 29 4.9
05_01_0080 - 535443-535481,535569-535698,536483-536586,536686-53... 29 4.9
08_01_0262 + 2134038-2134610 28 6.5
06_01_0470 + 3336154-3336708 28 6.5
01_03_0093 - 12422558-12422607,12422679-12422935,12423565-124239... 28 6.5
01_01_0880 + 6903535-6903932,6904931-6905022,6905601-6905680,690... 28 6.5
10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696 28 8.6
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 28 8.6
09_02_0223 + 5977138-5977459,5979842-5980842 28 8.6
04_01_0074 - 795256-795279,795350-795460 28 8.6
02_05_1120 + 34257504-34258294,34258483-34258571,34258616-342587... 28 8.6
02_02_0489 + 10869482-10871218 28 8.6
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 35.5 bits (78), Expect = 0.043
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +2
Query: 461 WVYERDHTIVAEF--DLACEEWK-----RTLVGTIHSAGVFMALPITAFISDNYGRRTAL 619
WV E ++ F L EEW +L+ ++ AG+ + F+SD YGRR L
Sbjct: 225 WVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVFAGMLIGASGWGFVSDKYGRRICL 284
Query: 620 IMTXXXXXXXXXXXXFSNSYVLYVXLEFV 706
+ + FS +Y + L F+
Sbjct: 285 LFSTLFASGMGFLSAFSPNYSCLLALRFL 313
>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 31.5 bits (68), Expect = 0.70
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 577 HSIHFGQLWKTYGPHHD 627
H ++F WK YGPHHD
Sbjct: 954 HGLYFKVRWKGYGPHHD 970
>05_04_0286 + 19833114-19834053,19834149-19834165
Length = 318
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 356 WALPESG-GRCDRLRPVGGGCGPGSFHANETLTCDSW 463
WALPE+ G C R GG CG + C W
Sbjct: 242 WALPEANRGFCGACRATGGVCGHDGDSHGDLCLCGDW 278
>07_03_1177 -
24574682-24574852,24575047-24575618,24575711-24576068,
24576108-24576152
Length = 381
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 311 CEVSPPEFDTDFWGVWALPESGGRCDRLRPVGGGCGPG 424
C +P F D W W L SG R RP+ GG G G
Sbjct: 5 CTCNPRTFSGDGWRWWCL--SGARRAAARPLVGGGGAG 40
>03_05_1096 -
30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -2
Query: 423 PGPQPPPTGRSRS----HRPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCTAPVA 271
P P PPP G S S + D G+A TP+ S ++ GG G ++P A
Sbjct: 22 PPPPPPPPGSSSSPLNRQKQGDPGQA-TPRLSAADEGGSVGGGGVAAASGSSPSA 75
>05_07_0280 -
28920864-28920971,28921076-28921175,28921267-28921394,
28922013-28922180,28922280-28922395,28922584-28922736,
28922904-28923047,28923401-28924133
Length = 549
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 423 PGPQPPPTGRSRSHRPPDSGR--AQTPQKSVSNSG 325
P PQPPP + RS PP Q PQ++ + G
Sbjct: 40 PKPQPPPPQQPRSQPPPPPRHQPQQAPQQAAAEDG 74
>05_02_0160 -
7194699-7195019,7195207-7195368,7195806-7195953,
7196286-7196362,7196717-7196787,7196891-7196977,
7197662-7198201,7198430-7198439
Length = 471
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 417 PQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSG 304
P PPP +R +PP + P +++SGG S+SG
Sbjct: 32 PSPPPAYANRPPQPPST----PPAAMINSSGGSGSYSG 65
>11_05_0030 - 18487272-18487544
Length = 90
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 362 LPESGGRCDRLRPVGGG 412
+ +GGRCD +RP GGG
Sbjct: 4 MQRAGGRCDVIRPAGGG 20
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -2
Query: 423 PGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTLHLYCT 283
P P PPP+ + R P + R TP + S+S D + + CT
Sbjct: 10 PQPPPPPSPPNPPPRAPRATRTATPDDASSSSAVDDAAALLAEAGCT 56
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 518 WKRTLVGTIHSAGVFMALPITAFISDNYGRRTALIM 625
W + ++ ++ AG + I + +D YGRRT++++
Sbjct: 66 WLQEMIVSMAVAGAIIGAAIGGWANDRYGRRTSILV 101
>06_03_0750 -
24140988-24141037,24141108-24141345,24142158-24142232,
24142345-24142413,24142550-24142581,24143503-24143583,
24143791-24143851,24144135-24144275,24144372-24144563
Length = 312
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -2
Query: 423 PGPQPPPTGRSRSHRPPD---SGRAQTPQKSVSNSGGDTSHSG 304
P P PPP S S R PD G+A + + SG D G
Sbjct: 43 PPPPPPPPPSSSSKRKPDPASKGKAAAKKGKTAASGEDGGDGG 85
>05_01_0080 -
535443-535481,535569-535698,536483-536586,536686-536903,
537755-537762,538146-538183,538475-538668,539168-539296,
539392-539481,539726-539839,540008-540154,540228-540293,
540876-540987
Length = 462
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 450 VKVSFA*KLPGPQPPPTGRSRSHRPPDSGRAQTPQ 346
V S A P P PPP R +P RAQ Q
Sbjct: 317 VDCSLAIPSPPPPPPPPSEMRKTKPSKQSRAQAQQ 351
>08_01_0262 + 2134038-2134610
Length = 190
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 450 VKVSFA*KLPGPQ---PPPTGRSRSHRPPDSGRAQTPQKSVSNSGG 322
VKV A PG P P+ + P + GR TP S S SGG
Sbjct: 124 VKVEAAAAAPGGSSTTPSPSPSPAALPPVNGGRPVTPSSSASKSGG 169
>06_01_0470 + 3336154-3336708
Length = 184
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -2
Query: 462 QESHVKVSFA*KLPGPQPPPTGRSRSHRPPDSGRAQTPQKS 340
Q S V + L PQPPP R R+ + PD R TP S
Sbjct: 142 QHSVVGAAAPVPLQPPQPPPPQRRRT-KNPDLNREPTPDTS 181
>01_03_0093 -
12422558-12422607,12422679-12422935,12423565-12423932,
12423939-12424800,12425247-12425464
Length = 584
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 424 AWATATANRSEPVASPPGLGESPDSPK 344
++ T +PV PGLG+SP SPK
Sbjct: 400 SFGLGTDATQKPVVPKPGLGKSPRSPK 426
>01_01_0880 +
6903535-6903932,6904931-6905022,6905601-6905680,
6905885-6905926,6906001-6906128,6906530-6906710,
6906801-6906979,6907469-6907717,6907950-6908193
Length = 530
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 504 RSNSATIV*SLS*TQESHVKVSFA*KLPGPQPPPTGRSRSHRPP 373
R S T S S + H S LP P P PT S S PP
Sbjct: 3 RGRSTTTTTSSSASNPFHAFASTLPFLPSPSPSPTSASPSPSPP 46
>10_02_0185 - 6386761-6387122,6387589-6387826,6388215-6389696
Length = 693
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 314 EVSPPEFDTDFWGVWALPES 373
E SPP D D WG W L +S
Sbjct: 234 EGSPPAVDDDRWGPWRLMDS 253
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 482 TIVAEFDLACEEWKRTLVGTIHSAGVFMALPITAFISDNYGRRTALI 622
++ AE++L+ + +L+ ++ G+ + +SDNYGRR A++
Sbjct: 74 SVQAEWELSAQA--ESLITSVVFVGMLVGAYSWGIVSDNYGRRQAVM 118
>09_02_0223 + 5977138-5977459,5979842-5980842
Length = 440
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -2
Query: 426 LPGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTS 313
LP P PP + PP SG S + G D+S
Sbjct: 389 LPSPPSPPPSDAEGDAPPPSGDGDEAPGSGAKGGKDSS 426
>04_01_0074 - 795256-795279,795350-795460
Length = 44
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 514 GVEEDFGRNHPQRWCFHG 567
G EED GR+HP+ +C G
Sbjct: 26 GGEEDEGRDHPEAFCMFG 43
>02_05_1120 +
34257504-34258294,34258483-34258571,34258616-34258713,
34259269-34259292,34259314-34259404,34259761-34259813,
34259933-34260151
Length = 454
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -2
Query: 423 PGPQPPPTGRSRSHRPPDSGRAQTPQKSVSNSGGDTSHSGTLHL 292
P P PPP R + P G + P S+ D S HL
Sbjct: 31 PPPPPPPNDRDDASPKPSEGEGRNPAASLFQDLRDRLMSTPSHL 74
>02_02_0489 + 10869482-10871218
Length = 578
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -2
Query: 429 KLPGPQPPPTGRSRSHRPPDSGRAQTPQKSVSN 331
K P+P P+G+++ +P S A P+ + S+
Sbjct: 123 KRAAPEPAPSGKAKKAKPEKSSSAAAPEPAPSS 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,949,617
Number of Sequences: 37544
Number of extensions: 509074
Number of successful extensions: 2292
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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