Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_N14
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.95 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.95 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.8  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   3.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   8.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 205 YDISFDTDIHTVFG 246
           YDIS  TD+H +FG
Sbjct: 84  YDISNYTDVHPIFG 97


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 205 YDISFDTDIHTVFG 246
           YDIS  TD+H +FG
Sbjct: 84  YDISNYTDVHPIFG 97


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 250 NARKQYGYQYRKIYRNLVATELSQLP 173
           N    Y   Y+K+Y+N +   + Q+P
Sbjct: 104 NYNNNYNNNYKKLYKNYI-INIEQIP 128


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 250 NARKQYGYQYRKIYRNLVATELSQLP 173
           N    Y   Y+K+Y+N +   + Q+P
Sbjct: 104 NYNNNYNNNYKKLYKNYI-INIEQIP 128


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 250 NARKQYGYQYRKIYRNLVATELSQLP 173
           N +K Y   YRK+Y N+   E   +P
Sbjct: 95  NYKKLYCNNYRKLYYNINYIEQIPIP 120


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 278 GAVQYRCKVPECEVSPPEFDTDFWGVWALPESGGRCDRLR 397
           G  ++RC+V     + P F T +     LP +G + + LR
Sbjct: 346 GNAEFRCEVSTHPQAGPHFITWYKDGRQLPGTGRQSELLR 385


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 278 GAVQYRCKVPECEVSPPEFDTDFWGVWALPESGGRCDRLR 397
           G  ++RC+V     + P F T +     LP +G + + LR
Sbjct: 346 GNAEFRCEVSTHPQAGPHFITWYKDGRQLPGTGRQSELLR 385


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 398 PVGGGCGPGSFHANETLT 451
           P G  CGPG+  A   L+
Sbjct: 151 PTGSSCGPGAAAAAALLS 168


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 20  TSARALXSLYQTTNKIIKRNCDVK 91
           T  RAL   +QTT++ ++ + ++K
Sbjct: 178 TDGRALLGRFQTTSQNLEDDVEIK 201


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 143 SNELDMDAVWGELGQFGR 196
           SN  D+D V+G L  F R
Sbjct: 87  SNFTDVDPVYGTLADFDR 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,174
Number of Sequences: 438
Number of extensions: 4596
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)