Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_N11
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.14 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.77 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.4  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   7.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.5  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 198 VVELGGYLRI-QAILNKFVVIFCPANIRILPSYLIIGYFSIALRHSINF 55
           +VE+GG+L   + +L KFV ++ P  + ++ S +++       RH  NF
Sbjct: 137 IVEIGGWLAFTKQLLIKFVEVY-PLFVLLIVSNVVLKILVEKYRHQKNF 184


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 352 HTKKHFYWIHVRDLNLKIV 296
           +T + +YW++V  LNL IV
Sbjct: 50  NTNRKYYWLNVCCLNLSIV 68


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 458 CFIFSSSGPLTCTVGVR 408
           C IF +   LTC  G+R
Sbjct: 40  CIIFGAIATLTCIEGLR 56


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 458 CFIFSSSGPLTCTVGVR 408
           C IF +   LTC  G+R
Sbjct: 36  CIIFGAIATLTCIEGLR 52


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 571 CGKIPKDMYEDELIPLFERCGTIWDLRLMMDPMTGANR 684
           C   P +  E +   L E CG ++   LM+D +  A R
Sbjct: 3   CPLRPSEAQEGD--QLSEECGMLYGEYLMLDKILEAQR 38


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 571 CGKIPKDMYEDELIPLFERCGTIWDLRLMMDPMTGANR 684
           C   P +  E +   L E CG ++   LM+D +  A R
Sbjct: 3   CPLRPSEAQEGD--QLSEECGMLYGEYLMLDKILEAQR 38


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 571 CGKIPKDMYEDELIPLFERCGTIWDLRLMMDPMTGANR 684
           C   P +  E +   L E CG ++   LM+D +  A R
Sbjct: 3   CPLRPSEAQEGD--QLSEECGMLYGEYLMLDKILEAQR 38


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 151 VCGNLLSGQHQN 116
           VCG+  SG+H N
Sbjct: 40  VCGDFSSGKHYN 51


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 151 VCGNLLSGQHQN 116
           VCG+  SG+H N
Sbjct: 40  VCGDFSSGKHYN 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,375
Number of Sequences: 336
Number of extensions: 3022
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)