Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_N10
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK090911-1|BAC03545.1|  134|Homo sapiens protein ( Homo sapiens ...    31   4.2  
AB209432-1|BAD92669.1|  526|Homo sapiens Ariadne-1 protein homol...    31   4.2  
AJ252246-1|CAC81020.1|  892|Homo sapiens kainate receptor subuni...    31   5.6  
Y11072-1|CAA71955.1|  685|Homo sapiens synaptopodin protein.           30   9.8  
BC146665-1|AAI46666.1|  685|Homo sapiens synaptopodin protein.         30   9.8  
BC142683-1|AAI42684.1|  685|Homo sapiens SYNPO protein protein.        30   9.8  
AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.         30   9.8  
AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.         30   9.8  
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.     30   9.8  

>AK090911-1|BAC03545.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33592 fis, clone BRAMY2012691. ).
          Length = 134

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 27  VVASAPLRQSNSQRRKTW*SWRSAPKRALSSRCLQSAQKRV*CPRFSML 173
           +++S  LR  + +R  +W  WRSAP R+ +  C+        C R S L
Sbjct: 8   IISSQRLRCCSRRRTASW-RWRSAPSRSSACDCISVFSTSSSCTRHSRL 55


>AB209432-1|BAD92669.1|  526|Homo sapiens Ariadne-1 protein homolog
           variant protein.
          Length = 526

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -3

Query: 237 GPRRPRSFPLYTSSPRRRWERRASKSAD-TTHVF-EPIEDSASLTRVL 100
           GPRRPR  P  ++S RR   RRA  S +   + F E I++ A++TR+L
Sbjct: 57  GPRRPRPLPA-SASVRRAPARRAMDSDEGYNYEFNEVIQNPATITRIL 103


>AJ252246-1|CAC81020.1|  892|Homo sapiens kainate receptor subunit
           protein.
          Length = 892

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -3

Query: 210 LYTSSPRRRWERRASKSADTTHVFEPIEDSASLTRVLAQTAKTTTFS 70
           LY S    + E+RA       +VF PI +S S++ VL+ +  +++ S
Sbjct: 843 LYKSKKNAQLEKRAKTKLPQDYVFLPILESVSISTVLSSSPSSSSLS 889


>Y11072-1|CAA71955.1|  685|Homo sapiens synaptopodin protein.
          Length = 685

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 319 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 200
           S  L + + Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>BC146665-1|AAI46666.1|  685|Homo sapiens synaptopodin protein.
          Length = 685

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 319 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 200
           S  L + + Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>BC142683-1|AAI42684.1|  685|Homo sapiens SYNPO protein protein.
          Length = 685

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 319 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 200
           S  L + + Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>AF499137-1|AAQ07403.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 319 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 200
           S  L + + Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>AF499136-1|AAQ07402.1|  903|Homo sapiens synaptopodin protein.
          Length = 903

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 319 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 200
           S  L + + Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227


>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
          Length = 1015

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 319 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 200
           S  L + + Q  T+V+  D  MS   + TTPT  +S +HF
Sbjct: 301 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,813,190
Number of Sequences: 237096
Number of extensions: 2016429
Number of successful extensions: 6132
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6132
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)