Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_N05
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.3  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 616 FVQDQLKGDPVTELRVKYLKRL 681
           F  +Q++G PVT L  + +KRL
Sbjct: 598 FEGNQVEGSPVTSLNREEIKRL 619


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 256 SQMLKETENTEXVNKHLERIGY 321
           ++ L+E +  E V KH + IGY
Sbjct: 188 TEFLEEHKIKEIVKKHSQFIGY 209


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 529 SNNGLKYCALIPGAIRGALQMV 594
           +NN  KYC  + G I+  + ++
Sbjct: 241 TNNQAKYCTTLIGLIKNCVIVI 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,384
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)