Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_N05
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015980-1|AAV36865.1|  178|Drosophila melanogaster RE68712p pro...   248   7e-66
AE014296-1657|AAF50270.3|  178|Drosophila melanogaster CG3911-PA...   248   7e-66
AF145611-1|AAD38586.1|  390|Drosophila melanogaster BcDNA.GH0292...    29   5.9  
AE014297-46|AAF52151.3|  390|Drosophila melanogaster CG1102-PA p...    29   5.9  

>BT015980-1|AAV36865.1|  178|Drosophila melanogaster RE68712p
           protein.
          Length = 178

 Score =  248 bits (606), Expect = 7e-66
 Identities = 118/169 (69%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
 Frame = +1

Query: 178 MSRQXSXXDAKKVNSELLTLTYGALVSQMLKETENTEXVNKHLERIGYNMGVXLIEDFLA 357
           MSRQ S  DAKKVNSE LTLTYGALV+QML++ EN E VNK LERIGYNMG+ LIEDFLA
Sbjct: 1   MSRQASRLDAKKVNSEFLTLTYGALVTQMLRDFENAEDVNKQLERIGYNMGMRLIEDFLA 60

Query: 358 RTTSTRCLEMRETADKIQQAFKLYLXMQPTVTSXSSAGDEFXLVWDHCPLSEWVEMPSN- 534
           RT++ RCLEMRETAD+IQQAF++YL +QPT+++ S A DEF LV+D  PL+E+VE+P + 
Sbjct: 61  RTSAPRCLEMRETADRIQQAFRIYLNIQPTISNWSPASDEFSLVFDSNPLTEFVELPPDL 120

Query: 535 NGLKYCALIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKRL 681
             L+Y A++ G IRGAL+MVQL+VQCWFVQDQLKGD VTELRVK+++RL
Sbjct: 121 TNLRYSAILSGCIRGALEMVQLEVQCWFVQDQLKGDNVTELRVKFVRRL 169


>AE014296-1657|AAF50270.3|  178|Drosophila melanogaster CG3911-PA
           protein.
          Length = 178

 Score =  248 bits (606), Expect = 7e-66
 Identities = 118/169 (69%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
 Frame = +1

Query: 178 MSRQXSXXDAKKVNSELLTLTYGALVSQMLKETENTEXVNKHLERIGYNMGVXLIEDFLA 357
           MSRQ S  DAKKVNSE LTLTYGALV+QML++ EN E VNK LERIGYNMG+ LIEDFLA
Sbjct: 1   MSRQASRLDAKKVNSEFLTLTYGALVTQMLRDFENAEDVNKQLERIGYNMGMRLIEDFLA 60

Query: 358 RTTSTRCLEMRETADKIQQAFKLYLXMQPTVTSXSSAGDEFXLVWDHCPLSEWVEMPSN- 534
           RT++ RCLEMRETAD+IQQAF++YL +QPT+++ S A DEF LV+D  PL+E+VE+P + 
Sbjct: 61  RTSAPRCLEMRETADRIQQAFRIYLNIQPTISNWSPASDEFSLVFDSNPLTEFVELPPDL 120

Query: 535 NGLKYCALIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKRL 681
             L+Y A++ G IRGAL+MVQL+VQCWFVQDQLKGD VTELRVK+++RL
Sbjct: 121 TNLRYSAILSGCIRGALEMVQLEVQCWFVQDQLKGDNVTELRVKFVRRL 169


>AF145611-1|AAD38586.1|  390|Drosophila melanogaster BcDNA.GH02921
           protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 561 SRCNQRCSTDGTTRCTMLVCAGSVE 635
           S CNQR +T   T  T  +CAG VE
Sbjct: 303 SECNQRYATQRRTVTTKQMCAGGVE 327


>AE014297-46|AAF52151.3|  390|Drosophila melanogaster CG1102-PA
           protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 561 SRCNQRCSTDGTTRCTMLVCAGSVE 635
           S CNQR +T   T  T  +CAG VE
Sbjct: 303 SECNQRYATQRRTVTTKQMCAGGVE 327


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,367,371
Number of Sequences: 53049
Number of extensions: 440987
Number of successful extensions: 839
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)