Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_N01
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0152 - 15767985-15768317                                         30   1.9  
03_05_1031 + 29857759-29857905,29858118-29858124,29858568-29858725     29   4.5  
01_01_0521 - 3826257-3826616,3826758-3826918,3826992-3827049,382...    28   7.8  

>02_03_0152 - 15767985-15768317
          Length = 110

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 664 WPPSSGEWKKPSPLVSALTSPAAGL 590
           WPPS G W    P + A   P+ GL
Sbjct: 48  WPPSGGHWSSSEPPLVAAGMPSPGL 72


>03_05_1031 + 29857759-29857905,29858118-29858124,29858568-29858725
          Length = 103

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 189 GMELMIELCYYPSVLTVINSDSDRHCDTQISR 284
           GMEL ++ C+Y   +TV   DS + CD ++ R
Sbjct: 55  GMELEMQTCHYTGQITV--QDSRKTCDLEMPR 84


>01_01_0521 -
           3826257-3826616,3826758-3826918,3826992-3827049,
           3827426-3827497,3827582-3827639,3828231-3828347,
           3828630-3828782,3829182-3829346,3829814-3830132,
           3830276-3830780
          Length = 655

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 652 SGEWKKPSPLVSALTSPAAGLP 587
           +G W+KPSP +SA   P A  P
Sbjct: 94  AGGWRKPSPSLSAAAPPVAVAP 115


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,274,906
Number of Sequences: 37544
Number of extensions: 331434
Number of successful extensions: 1007
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)