Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M24
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.46 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.4  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   3.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.4  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +1

Query: 202 LLSNRFGEDEEA 237
           +LSNRFGE+EEA
Sbjct: 138 ILSNRFGENEEA 149


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 275 D*ILYQSRTNPSGT*TGKPMRL*EKDPKPSSKDRTILSIEINKGKKK 415
           D I Y+S TNPS   +GK + +      P+  D T+  I+   G  K
Sbjct: 50  DKIRYESLTNPSRLDSGKELYI---KIIPNKNDGTLTIIDTGIGMTK 93


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 30  GSCQQLVHSPSRPSSAKQXGNIKHHTFRFY 119
           G C  LV +P R       GN+  ++ +++
Sbjct: 284 GGCHILVATPGRLKDFVNRGNVSFNSLKYF 313


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 600 IFSSIHVRHVVFYGSMMLSNNIDFD 526
           +F  +   HVVF    ++ +NID D
Sbjct: 5   VFLVLTCAHVVFLEEYVIPDNIDID 29


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +1

Query: 58  PVGLHQLNKXATLNTILFVFMILGAFVKAQ 147
           P+G+  +++    N +LF+F+++ + V  Q
Sbjct: 148 PLGILLISQDVIANVLLFIFIVVKSGVAFQ 177


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 273 PIKFFTNREPTLLVPELESL*GSKKKTPNL 362
           P+K        L +  LESL    + TP +
Sbjct: 107 PVKIMLQNATDLFIKSLESLKPGNQSTPGI 136


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 140 KPKDRFTLASVP*GIQPWRLICYRT 214
           KP+ R TL     GIQP+  + + T
Sbjct: 453 KPRQRGTLEGNNMGIQPYDSLLWHT 477


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 311 QKGWFSIGKEFNRLIRL 261
           +K W ++  ++NRL  L
Sbjct: 261 EKSWIALNDDYNRLCHL 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,623
Number of Sequences: 336
Number of extensions: 3521
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)