Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_M18
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 30 2.4
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 30 2.4
Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical pr... 29 4.2
AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose d... 29 4.2
Z70036-1|CAA93875.1| 522|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein. 28 7.4
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 28 7.4
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 28 7.4
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 635 PDLLTKEIIHLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSS 784
PD L+ + + ME + +EK FN +I ++F S + + SP+ ++ SS
Sbjct: 358 PDRLSSILSIMPIMENQQKEEKSFN-VILRSFYSNVSILVSPLYDEIMSS 406
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Frame = +2
Query: 479 QTMNSGEEDKQIPSPMNYFRNVIIPKYM---IPHYIKYVDKPGFLPQPIVFTDSKPDLLT 649
Q + D P PM F VI+P + P I D F QP+V + D L
Sbjct: 1174 QPLKDVRRDPNFPEPMIVFGEVILPSALELSPPLIINLFDARAFNRQPLVGSCLVSD-LH 1232
Query: 650 KEIIHL-NEMETDENDEKEFNDL-ITKNFMSRIMEVGSP 760
K + H+ ++++D + E DL IT+ F I V P
Sbjct: 1233 KYVSHIVPKVKSDHAERWEQLDLVITEEFDQIIRMVRVP 1271
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Frame = +2
Query: 479 QTMNSGEEDKQIPSPMNYFRNVIIPKYM---IPHYIKYVDKPGFLPQPIVFTDSKPDLLT 649
Q + D P PM F VI+P + P I D F QP+V + D L
Sbjct: 1174 QPLKDVRRDPNFPEPMIVFGEVILPSALELSPPLIINLFDARAFNRQPLVGSCLVSD-LH 1232
Query: 650 KEIIHL-NEMETDENDEKEFNDL-ITKNFMSRIMEVGSP 760
K + H+ ++++D + E DL IT+ F I V P
Sbjct: 1233 KYVSHIVPKVKSDHAERWEQLDLVITEEFDQIIRMVRVP 1271
>Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical
protein F29F11.1 protein.
Length = 481
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 154 TSPLKVTAGQLLPKKYMSWVLGNIV*NSFQSNLWQKIFLKCTLFLFVTQKISEINSI 324
+SP + A L + Y +WV N + +N W K F+ Q+IS INSI
Sbjct: 191 SSPEGLQAVAELVRIYENWVPRNRI---ITTNTWSSELSKLVANAFLAQRISSINSI 244
>AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose
dehydrogenase protein.
Length = 481
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 154 TSPLKVTAGQLLPKKYMSWVLGNIV*NSFQSNLWQKIFLKCTLFLFVTQKISEINSI 324
+SP + A L + Y +WV N + +N W K F+ Q+IS INSI
Sbjct: 191 SSPEGLQAVAELVRIYENWVPRNRI---ITTNTWSSELSKLVANAFLAQRISSINSI 244
>Z70036-1|CAA93875.1| 522|Caenorhabditis elegans Hypothetical
protein T01B4.1 protein.
Length = 522
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 629 SKPDLLTKEII-HLNEMETDENDEKEFNDLITKNFMSR 739
S+ LL ++ HL +M +++EK +LITK F+ R
Sbjct: 77 SESSLLAVNLLEHLKQMNCGQSNEKRCLELITKTFIQR 114
>Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 641 LLTKEIIHLNEMETDENDEKEFNDLITKNFMSR 739
LL ++ ++ + E +E+DE+ FN ++ NF +R
Sbjct: 285 LLGEQFVYQPDEEDEEDDEEVFNVSVSSNFSTR 317
>Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 641 LLTKEIIHLNEMETDENDEKEFNDLITKNFMSR 739
LL ++ ++ + E +E+DE+ FN ++ NF +R
Sbjct: 285 LLGEQFVYQPDEEDEEDDEEVFNVSVSSNFSTR 317
>AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein.
Length = 741
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +2
Query: 662 HLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKH 820
H NE + + ++ +T+N M+ ++ P P+ V S G +N +H
Sbjct: 111 HQNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLPSNGFWMDGVNQQH 163
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +2
Query: 662 HLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKH 820
H NE + + ++ +T+N M+ ++ P P+ V S G +N +H
Sbjct: 181 HQNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLPSNGFWMDGVNQQH 233
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +2
Query: 662 HLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKH 820
H NE + + ++ +T+N M+ ++ P P+ V S G +N +H
Sbjct: 112 HQNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLPSNGFWMDGVNQQH 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,058,643
Number of Sequences: 27780
Number of extensions: 452188
Number of successful extensions: 1070
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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