Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M18
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   1.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   1.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   4.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   8.3  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 573 TLNTSINLDFCRNQSYSQIQ 632
           T + S+++D C NQ+Y+ +Q
Sbjct: 567 TTDQSMDIDVCDNQTYTSLQ 586



 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 671 EMETDENDEKEFNDLITK 724
           ++E  E+  K FNDL+T+
Sbjct: 526 KIEVTEDCNKSFNDLLTQ 543


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 665 LNEMETDENDEKEFNDLITKNFM 733
           LN++E + ++ KE ND   +NF+
Sbjct: 75  LNQLEIESDNSKEVNDKKEENFI 97


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 635 PDLLTKEIIHLNEMETDENDEKEFNDLITKNFMSRIM 745
           PD+  K I  L+E+  D +    F D +   ++ R +
Sbjct: 368 PDIQEKVIQELDEIFGDSDRPATFQDTLEMKYLERCL 404


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 209 HDIYFLGSSWPAV 171
           +D Y L SSWPA+
Sbjct: 431 NDWYSLASSWPAL 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,232
Number of Sequences: 438
Number of extensions: 5928
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)