Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M17
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   2.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.7  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 309 LSNLTLTTEHRWYPRARDKKAKKTEM 386
           ++ +TLT    W+  AR +  K+ +M
Sbjct: 123 ITKMTLTQVSTWFANARRRLKKENKM 148


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 171 DYDFPYEHSRALPEETSKD 227
           +YD PYE S +  + T+KD
Sbjct: 891 EYDGPYETSISSGQYTTKD 909


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +3

Query: 48   NINKMSYLTRKIALIPR 98
            N+N +S+ TR++ ++P+
Sbjct: 1026 NMNNVSWGTREVTVVPK 1042


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +3

Query: 48   NINKMSYLTRKIALIPR 98
            N+N +S+ TR++ ++P+
Sbjct: 1026 NMNNVSWGTREVTVVPK 1042


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,790
Number of Sequences: 336
Number of extensions: 1614
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)