Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M17
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533495-1|CAG38526.1|  142|Homo sapiens MRPL42 protein.               56   9e-08
BC040240-1|AAH40240.1|  142|Homo sapiens mitochondrial ribosomal...    56   9e-08
AK000285-1|BAA91054.1|  142|Homo sapiens protein ( Homo sapiens ...    56   9e-08
AF135160-1|AAF43784.1|  142|Homo sapiens unknown protein.              56   9e-08
AB051626-1|BAB54953.1|   51|Homo sapiens mitochondrial ribosomal...    31   1.7  
AL356115-1|CAI40902.1|  588|Homo sapiens KIAA1128 protein.             30   4.0  
AF241785-1|AAG44473.1|  566|Homo sapiens NPD012 protein.               30   4.0  
AB032954-1|BAA86442.1|  588|Homo sapiens KIAA1128 protein protein.     30   4.0  
BC016613-1|AAH16613.1|  571|Homo sapiens similar to hypothetical...    30   5.3  
AE006464-2|AAK61234.1|  871|Homo sapiens unknown protein.              30   5.3  
AK098126-1|BAC05240.1|  133|Homo sapiens protein ( Homo sapiens ...    29   7.0  

>CR533495-1|CAG38526.1|  142|Homo sapiens MRPL42 protein.
          Length = 142

 Score = 55.6 bits (128), Expect = 9e-08
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = +3

Query: 123 KIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFAR 302
           ++ +  DG TIV  H   D PYEH++ +P      N   + T  D+V +   E K E   
Sbjct: 48  ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNN--EETH-DQVLKTRLEEKVEHLE 104

Query: 303 -----KQLSNLTLTTEHRWYPRARDKKAKKTEMNRP 395
                +QLS +  TT+HRWYP  R  + +K  +N P
Sbjct: 105 EGPMIEQLSKMFFTTKHRWYPHGRYHRCRK-NLNPP 139


>BC040240-1|AAH40240.1|  142|Homo sapiens mitochondrial ribosomal
           protein L42 protein.
          Length = 142

 Score = 55.6 bits (128), Expect = 9e-08
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = +3

Query: 123 KIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFAR 302
           ++ +  DG TIV  H   D PYEH++ +P      N   + T  D+V +   E K E   
Sbjct: 48  ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNN--EETH-DQVLKTRLEEKVEHLE 104

Query: 303 -----KQLSNLTLTTEHRWYPRARDKKAKKTEMNRP 395
                +QLS +  TT+HRWYP  R  + +K  +N P
Sbjct: 105 EGPMIEQLSKMFFTTKHRWYPHGRYHRCRK-NLNPP 139


>AK000285-1|BAA91054.1|  142|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20278 fis, clone HEP03158. ).
          Length = 142

 Score = 55.6 bits (128), Expect = 9e-08
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = +3

Query: 123 KIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFAR 302
           ++ +  DG TIV  H   D PYEH++ +P      N   + T  D+V +   E K E   
Sbjct: 48  ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNN--EETH-DQVLKTRLEEKVEHLE 104

Query: 303 -----KQLSNLTLTTEHRWYPRARDKKAKKTEMNRP 395
                +QLS +  TT+HRWYP  R  + +K  +N P
Sbjct: 105 EGPMIEQLSKMFFTTKHRWYPHGRYHRCRK-NLNPP 139


>AF135160-1|AAF43784.1|  142|Homo sapiens unknown protein.
          Length = 142

 Score = 55.6 bits (128), Expect = 9e-08
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = +3

Query: 123 KIVIADDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFAR 302
           ++ +  DG TIV  H   D PYEH++ +P      N   + T  D+V +   E K E   
Sbjct: 48  ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNN--EETH-DQVLKTRLEEKVEHLE 104

Query: 303 -----KQLSNLTLTTEHRWYPRARDKKAKKTEMNRP 395
                +QLS +  TT+HRWYP  R  + +K  +N P
Sbjct: 105 EGPMIEQLSKMFFTTKHRWYPHGRYHRCRK-NLNPP 139


>AB051626-1|BAB54953.1|   51|Homo sapiens mitochondrial ribosomal
           protein L42 protein.
          Length = 51

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 303 KQLSNLTLTTEHRWYPRAR 359
           +QLS +  TT+HRWYP  R
Sbjct: 33  EQLSKMFFTTKHRWYPHGR 51


>AL356115-1|CAI40902.1|  588|Homo sapiens KIAA1128 protein.
          Length = 588

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 207 PEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKK 368
           PE    D        L+E+K++ +E+K +  + QL  L L T+H  + + +++K
Sbjct: 460 PEPEDGDKVYKNEDLLNEIKQLKDEIKKKDEKIQLLELQLATQHICHQKCKEEK 513


>AF241785-1|AAG44473.1|  566|Homo sapiens NPD012 protein.
          Length = 566

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 207 PEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKK 368
           PE    D        L+E+K++ +E+K +  + QL  L L T+H  + + +++K
Sbjct: 438 PEPEDGDKVYKNEDLLNEIKQLKDEIKKKDEKIQLLELQLATQHICHQKCKEEK 491


>AB032954-1|BAA86442.1|  588|Homo sapiens KIAA1128 protein protein.
          Length = 588

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 207 PEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKK 368
           PE    D        L+E+K++ +E+K +  + QL  L L T+H  + + +++K
Sbjct: 460 PEPEDGDKVYKNEDLLNEIKQLKDEIKKKDEKIQLLELQLATQHICHQKCKEEK 513


>BC016613-1|AAH16613.1|  571|Homo sapiens similar to hypothetical
           protein FLJ13841 protein.
          Length = 571

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 351 RARDKKAKKTE-MNRPYL*PSNFYCYRCNIAC 443
           RAR +K KK   + RP+  P N+ C++C   C
Sbjct: 15  RARSRKPKKPHYIPRPWGKPYNYKCFQCPFTC 46


>AE006464-2|AAK61234.1|  871|Homo sapiens unknown protein.
          Length = 871

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 351 RARDKKAKKTE-MNRPYL*PSNFYCYRCNIAC 443
           RAR +K KK   + RP+  P N+ C++C   C
Sbjct: 15  RARSRKPKKPHYIPRPWGKPYNYKCFQCPFTC 46


>AK098126-1|BAC05240.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40807 fis, clone TRACH2009268. ).
          Length = 133

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 123 KIVIADDGSTIVALHQDYDFPYEHSR 200
           ++ +  DG TIV  H   D  YEH++
Sbjct: 90  ELAVISDGRTIVCYHHSVDISYEHTK 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,654,822
Number of Sequences: 237096
Number of extensions: 839991
Number of successful extensions: 1438
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)