Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M09
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    30   0.027
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    30   0.027
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    30   0.027
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   3.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   4.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.3  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 29.9 bits (64), Expect = 0.027
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 582 KKAVAELKTRKKILEDKELSLAPAEDLFDRAKMEDLIKRRFFYDQSFAI 728
           +KAV +L T +K L +KE     AE L  R K+ DL KRR  Y+  F +
Sbjct: 48  QKAVEKLLTEQKELAEKE----EAETL-KRYKLNDLEKRREVYESIFKV 91


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 0.027
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 582 KKAVAELKTRKKILEDKELSLAPAEDLFDRAKMEDLIKRRFFYDQSFAI 728
           +KAV +L T +K L +KE     AE L  R K+ DL KRR  Y+  F +
Sbjct: 208 QKAVEKLLTEQKELAEKE----EAETL-KRYKLNDLEKRREVYESIFKV 251


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 0.027
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 582 KKAVAELKTRKKILEDKELSLAPAEDLFDRAKMEDLIKRRFFYDQSFAI 728
           +KAV +L T +K L +KE     AE L  R K+ DL KRR  Y+  F +
Sbjct: 208 QKAVEKLLTEQKELAEKE----EAETL-KRYKLNDLEKRREVYESIFKV 251


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 516 NVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELS 641
           N+    D    L   K  E++  + +  LK  KK+LED +++
Sbjct: 113 NLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMT 154


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 421 ISFIERLKYRILFEKSLWPI 480
           +SF +RLK R +   ++WP+
Sbjct: 554 VSFSDRLKSRGIRTAAIWPL 573


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 411 TADCVKDVNDY 379
           T DCV+ VNDY
Sbjct: 312 TLDCVQLVNDY 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,869
Number of Sequences: 336
Number of extensions: 3003
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)