Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M09
         (850 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20226| Best HMM Match : No HMM Matches (HMM E-Value=.)             155   6e-38
SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)               35   0.096
SB_17591| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.39 
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)                   31   1.2  
SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_35649| Best HMM Match : M (HMM E-Value=6e-09)                       29   4.8  
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)            29   4.8  
SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  
SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26)                28   8.3  
SB_27837| Best HMM Match : Vicilin_N (HMM E-Value=0.85)                28   8.3  

>SB_20226| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 613

 Score =  155 bits (375), Expect = 6e-38
 Identities = 70/113 (61%), Positives = 90/113 (79%)
 Frame = +3

Query: 471 MADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAP 650
           MA    EEIL+ LR +VKEQGDLVRKLKE+KAPE D++ A+ ELK RKK LE KE  +AP
Sbjct: 1   MASANDEEILSNLRKSVKEQGDLVRKLKEDKAPENDVEIAIKELKARKKALEKKEKEIAP 60

Query: 651 AEDLFDRAKMEDLIKRRFFYDQSFAIYGGITGQFDFGPMGCALKSNMIHLWKK 809
            ++ FDR K+EDL+KRRFF+  +F IYGG+ G +D+GP GCA++SN+I+LWKK
Sbjct: 61  QDESFDRGKLEDLLKRRFFFVPAFEIYGGVAGLYDYGPAGCAMESNVINLWKK 113


>SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 610

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 23/58 (39%), Positives = 29/58 (50%)
 Frame = +3

Query: 480 PKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPA 653
           PK+ + L  L   +KE   L  KL EE    I +KK V EL+    IL+ K   LA A
Sbjct: 267 PKVLDYLQSLETQIKEVNLLNDKLSEE---NIKLKKRVQELENENNILKAKNPELASA 321


>SB_17591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 567

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
 Frame = +3

Query: 477 DPKIEEILAPLRANVKEQ--GDLVRKLKEEKAPEIDIK----KAVAELKTRKKILE--DK 632
           D  IEE+L  +R          LV+ + +E  P+ D+K    K +   KTR KILE  DK
Sbjct: 2   DAYIEEVLGSMRDKEAPAVLAGLVQNILDEDIPD-DVKHRLLKPLVPAKTRGKILERFDK 60

Query: 633 ELSLAP-AEDLFDRAKME 683
           +L+     +DLF+  K+E
Sbjct: 61  KLATTGCTKDLFEMEKLE 78


>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
          Length = 493

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
 Frame = +3

Query: 435 KIKIPNPFREIIMADPKIEE----ILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAEL 602
           K K+  P RE+I + PK++E    +  PLR  ++ +  L ++ K+  A  I      AE+
Sbjct: 312 KKKLATPLREVIKSKPKLKETKKKLATPLRKEIQSKPAL-KETKKRLATPIR-----AEI 365

Query: 603 KTRKKILEDKELSLAPAEDLFDRAKMEDLIKRR 701
           +++ K+ E K+    P      RA++E+  K R
Sbjct: 366 ESKPKLKETKKKLATPV-----RAEIENKPKLR 393


>SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1091

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/91 (24%), Positives = 42/91 (46%)
 Frame = +3

Query: 426 LHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELK 605
           + ++ ++ N +  I    PK+    +P  A + E G +V KLK        +  A  EL 
Sbjct: 60  IRKEERMENAWDRIREKFPKMNPAKSPFTATLDEYGRVVIKLKRMGGKSYRLFDAGGEL- 118

Query: 606 TRKKILEDKELSLAPAEDLFDRAKMEDLIKR 698
             +K+    + +L P+ +   R+  E++ KR
Sbjct: 119 -NEKLPSSIKNNLGPSAEEITRSNEEEVAKR 148


>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
          Length = 1279

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +3

Query: 459 REIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKEL 638
           RE+     ++EE  + L++  +E  + + +LK++K      +   + LKT +++ +DKE 
Sbjct: 613 REVESLTTQLEEAKSALQSKKQELENTLNELKQKKTQGELQRNTDSLLKTVEELKQDKEE 672

Query: 639 SLAPAEDL 662
                EDL
Sbjct: 673 DFKYFEDL 680


>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6406

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 525  EQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPAEDLFDRA 674
            E  DL+RK+KE  A    + K  AEL   ++  E+  +++A  ED+F  A
Sbjct: 2977 EVDDLLRKIKELTAT---LNKREAELSVVEQAAEEYHVTVAHVEDVFASA 3023


>SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)
          Length = 716

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 522 KEQGDLVRKLKEEKAPEIDIK---KAVAELKTRKKILEDKELSLAPAEDLFDRA 674
           K++  +++  K EK  + D+K     VA    R +I   K  S  P E  FDRA
Sbjct: 176 KDESIIIKDQKPEKKYKDDVKTMSSKVAPRSARSQITPQKRWSAPPTEKGFDRA 229


>SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1261

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 549 LKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPA 653
           LK E A +ID+     E  T+++ILE +E + APA
Sbjct: 270 LKIEGATDIDVGLNEYETITKQEILESQEFAQAPA 304


>SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26)
          Length = 800

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
 Frame = +3

Query: 231 LTPRGHRPANKIVLSINFESIRIIDLS*MRHVLSLVY-KCSVFSKQVTVFSNHLRLSHSQ 407
           LT +  +P   +V+  + ++   +D+  +   L L+      FSK    F    RLS   
Sbjct: 430 LTEQTQQPPASMVMDEDDDAEEEVDIEYVTEALDLMDPNYRAFSKIFEAF----RLSDPA 485

Query: 408 QWGSNKLHRKIKIPNPFREIIMADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKK 587
           +    K   + K+P   +      P++++  + L   ++E  + V K  E   P++  KK
Sbjct: 486 EKEGGKKDDQKKVPEDKK------PEVKD--SALDTKMEEDDEEVVKPPESDQPKLSKKK 537

Query: 588 -------AVAELKTRKKILEDKELSLAPAEDLFDRAKMEDLIK 695
                  +VAELK +  I+E +E      E    +AKM + ++
Sbjct: 538 LRKMNRLSVAELKQKTGIMEMREAMQEKEEQKTLKAKMREKVR 580


>SB_27837| Best HMM Match : Vicilin_N (HMM E-Value=0.85)
          Length = 206

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 510 RANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPAEDLFDRAKMEDL 689
           R   KE+ +  RKLKE+K  EI+ K      K  K+IL+   L +  +   + R  +  L
Sbjct: 144 RRKEKEEFEKQRKLKEDKQKEIEEKINEWIDKKNKEILKMPTLKVNESTGEYRRELVNRL 203

Query: 690 IKR 698
           I R
Sbjct: 204 IDR 206


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,346,049
Number of Sequences: 59808
Number of extensions: 380060
Number of successful extensions: 1033
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)