Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_M08
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 33 0.27
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 30 1.9
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81549-1|CAB04466.1| 343|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66513-10|CAH19084.1| 488|Caenorhabditis elegans Hypothetical p... 29 4.3
Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z82259-2|CAB05129.1| 474|Caenorhabditis elegans Hypothetical pr... 29 5.7
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.087
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 254 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 364
T+V+ E PP KFSP+GK+ +A + D T L+++++
Sbjct: 250 TLVDDENPPVAFVKFSPNGKYILASNLDST-LKLWDF 285
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +2
Query: 254 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEYR 367
T+++ E PP KFSP+GK+ +A + + T L++++Y+
Sbjct: 269 TLIDEEHPPITHVKFSPNGKYILASNLNNT-LKLWDYQ 305
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 32 MASGSRSKFIYYXXPPPGAIDEKEFFCTEKIVPRKIKPQNIVIRLMEREIHG-SRKPGSH 208
+A GSR+ I Y PPG + C + V K++ +N+ R + G +RKP S
Sbjct: 316 VARGSRTNMISYHDLPPGTGNAPPMACPQ--VTLKLE-KNVPFEAKIRAVAGYTRKPISE 372
Query: 209 FHVVR-EFYQNVFPNLTIVNVEK 274
+R +++F ++ I +V++
Sbjct: 373 VQKMRPSDLESIFHSICIASVQR 395
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
protein ZK1236.3a protein.
Length = 1000
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 32 MASGSRSKFIYYXXPPPGAIDEKEFFCTEKIVPRKIKPQNIVIRLMEREIHG-SRKPGSH 208
+A GSR+ I Y PPG + C + V K++ +N+ R + G +RKP S
Sbjct: 506 VARGSRTNMISYHDLPPGTGNAPPMACPQ--VTLKLE-KNVPFEAKIRAVAGYTRKPISE 562
Query: 209 FHVVR-EFYQNVFPNLTIVNVEK 274
+R +++F ++ I +V++
Sbjct: 563 VQKMRPSDLESIFHSICIASVQR 585
>Z81549-1|CAB04466.1| 343|Caenorhabditis elegans Hypothetical
protein F55C9.1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 701 PLEDYSLHLVDLHQGKLCDTKHFXIDKIY 787
P+ DY LH++D+ G + KH+ +++
Sbjct: 128 PVRDYLLHVLDVTSGSTINIKHYDTSELF 156
>Z66513-10|CAH19084.1| 488|Caenorhabditis elegans Hypothetical
protein F54D5.15b protein.
Length = 488
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = +2
Query: 83 GAIDEKEFFCTEKIVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFPNLTIV 262
GA ++ C+ I P + P++ ++L + ++ + +P +++H + Q PNL+ V
Sbjct: 247 GANSRRDSMCSLSIAP-PLPPKSDAMQLRQATVNHASRPPTNYHQNGGYGQQYEPNLSSV 305
Query: 263 NV 268
+
Sbjct: 306 PI 307
>Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical
protein F54D5.15c protein.
Length = 561
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = +2
Query: 83 GAIDEKEFFCTEKIVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFPNLTIV 262
GA ++ C+ I P + P++ ++L + ++ + +P +++H + Q PNL+ V
Sbjct: 320 GANSRRDSMCSLSIAP-PLPPKSDAMQLRQATVNHASRPPTNYHQNGGYGQQYEPNLSSV 378
Query: 263 NV 268
+
Sbjct: 379 PI 380
>Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical
protein F54D5.15a protein.
Length = 563
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = +2
Query: 83 GAIDEKEFFCTEKIVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFPNLTIV 262
GA ++ C+ I P + P++ ++L + ++ + +P +++H + Q PNL+ V
Sbjct: 322 GANSRRDSMCSLSIAP-PLPPKSDAMQLRQATVNHASRPPTNYHQNGGYGQQYEPNLSSV 380
Query: 263 NV 268
+
Sbjct: 381 PI 382
>Z82259-2|CAB05129.1| 474|Caenorhabditis elegans Hypothetical
protein C28D4.2 protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.7
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Frame = +2
Query: 101 EFFCTEKIVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFP--NLTIVNVEK 274
E + T+ VP+ P I + +ERE++ H H F N N +++ K
Sbjct: 250 EMYLTQAKVPKSDYPSTITVAQLERELNFVEFFLQHSHSPVVFSHNDLQEGNFLLIDGYK 309
Query: 275 PPCFLRKFSPDGKHFIAFSADQTSLEI--YEYRGASSAGDLVAGYPTDLLNADADAHHRI 448
+PDGK E Y YRG G+ Y D A+A +++I
Sbjct: 310 LADDGTVLTPDGKPTNDDPLSLIDFEYCSYNYRG-FDLGNHFCEYGYDYNEAEA-PYYKI 367
Query: 449 RTHIF 463
H F
Sbjct: 368 HQHYF 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,107,836
Number of Sequences: 27780
Number of extensions: 442802
Number of successful extensions: 1034
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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