Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_M05
(864 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 55 8e-08
04_04_0819 - 28312667-28313219,28315157-28316430 46 3e-05
02_05_0264 + 27263562-27264830 46 4e-05
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 43 4e-04
06_03_0915 - 25929433-25930893 39 0.004
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 36 0.032
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 36 0.042
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 36 0.055
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 35 0.073
07_03_0546 - 19325526-19326054,19327109-19327631,19327898-193281... 33 0.22
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 33 0.29
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 32 0.68
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 31 1.2
01_05_0586 + 23443371-23444645 31 1.2
11_01_0643 - 5174154-5174254,5174296-5174346,5174611-5174739,517... 29 6.3
06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478 29 6.3
08_01_0211 - 1675189-1675439,1675520-1675784,1675903-1675982,167... 28 8.4
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 28 8.4
01_03_0016 + 11673258-11673854 28 8.4
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 54.8 bits (126), Expect = 8e-08
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Frame = +3
Query: 294 SDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSR 473
+ ++ N++ S +G+G+L +P AF+ AG + G G G +C+ LLV
Sbjct: 29 TSAQTLGNVVVSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCMLLLVDCRD---- 84
Query: 474 VAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQ 653
K+ ET + G + F R + + + G Y+I + +++
Sbjct: 85 --KLEEKESEETYHGHYTYGDLGEKCFGTIGRCLTEILILVSQAGGSVAYLIFIGQNLHS 142
Query: 654 IVDYFYADNGINETMYCLMFLVPILI-FTQIKNLKYLAPFSGFANILLVLTFLICL 818
+ ++ + L+P+ I + I++L L+PFS FA++ VL I +
Sbjct: 143 VFSQL-----MSPAAFIFAILLPMQIALSFIRSLSSLSPFSIFADVCNVLAMAIVI 193
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 46.4 bits (105), Expect = 3e-05
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Frame = +3
Query: 285 HPNSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLV----K 452
H +S ++FAN+ + +GSG+L +P F G + G + + + HC+ LLV +
Sbjct: 33 HLSSQPKTFANVFIAVVGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLVACRRR 92
Query: 453 TSQDVSRVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVIL 632
+ D ++A LG A GP A R +D + + C Y+I
Sbjct: 93 LAYDHPKIASFGDLGAA-------VCGP--------AGRHVVDAMLVLSQASFCVGYLIF 137
Query: 633 LVESVQQIVDYFYADNGINETMYC--LMFLVPILIF----TQIKNLKYLAPFSGFANIL 791
+ ++ + Y D+ + + +F+ +L F IK L LAP S FA+++
Sbjct: 138 ISNTMAHL--YPVGDSSPSSPLLTAKAIFIWVMLPFQLGLNSIKTLTLLAPLSIFADVV 194
>02_05_0264 + 27263562-27264830
Length = 422
Score = 46.0 bits (104), Expect = 4e-05
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Frame = +3
Query: 291 NSDVRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVS 470
+S ++FAN+ + +G+G+L +P F G G + + + +C+ LLV + ++
Sbjct: 33 SSQPKTFANVFIAVVGAGVLGLPYTFSRTGWAAGSILLLSVAALTFYCMMLLVACRRRLA 92
Query: 471 -RVAKVPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESV 647
K+ S G + +AVF GP R+ +D + + C Y+I + ++
Sbjct: 93 DEHPKIASFG--DLGDAVF-RGP---------GRLAVDTMLVLSQASFCVGYLIFISNTM 140
Query: 648 QQIVDYFYADNG--INETMYCLMFLVPI-LIFTQIKNLKYLAPFSGFANIL 791
+ F + ++ + ++P L IK L LAP S FA+++
Sbjct: 141 AHLYPVFAPSSNALLSPKALFIWAMLPFQLGLNSIKTLTLLAPLSIFADVV 191
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 42.7 bits (96), Expect = 4e-04
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Frame = +3
Query: 303 RSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAK 482
++ N++ S +G+G+L +P AF+ +G + G G G +C+ LL+ + +
Sbjct: 20 QTLGNIVVSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLLLDCRDKLREQEE 79
Query: 483 VPSLGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVD 662
V G + G + F R F + + + G Y++ + +++ +
Sbjct: 80 VDHDGN-------YTYGDLGEKCFGAIGRYFTEVTIILSQTGGSVAYLVFIGQNICSVFP 132
Query: 663 YFYA-----DNGINETMYCLMFLVPI-LIFTQIKNLKYLAPFSGFANILLVL 800
A ++ L L+P + I++L LAPFS A+ VL
Sbjct: 133 TTAAGGEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSILADACTVL 184
>06_03_0915 - 25929433-25930893
Length = 486
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 315 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVK 452
NL S +G+GI+A+PA K G VG+ +++G + + LLV+
Sbjct: 82 NLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVR 127
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 36.3 bits (80), Expect = 0.032
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 315 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 494
NL + +G+GI+A+PA+ K G I GI I++ + + +LV+ S + K+ S
Sbjct: 50 NLSTTIVGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVRCSHE----GKITSY 105
Query: 495 GY 500
G+
Sbjct: 106 GW 107
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 35.9 bits (79), Expect = 0.042
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 315 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 494
NL + +G+GI+A+PA+ K G I GI I++ + + +LV+ S K+ S
Sbjct: 90 NLSTTIVGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCSHQ----GKITSY 145
Query: 495 GY 500
G+
Sbjct: 146 GW 147
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 35.5 bits (78), Expect = 0.055
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +3
Query: 285 HPNSDVRSFA----NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVK 452
H + D SF+ NL + +G+GI+A+PA K G + G+ ++ + + LLV+
Sbjct: 30 HDHFDGASFSGAVFNLSTTIVGAGIMALPATMKVLGLVPGLILVMLAAVLTDASIELLVR 89
Query: 453 TSQDVSRVAKVPSLGYA 503
S+ V + ++G A
Sbjct: 90 FSRAVGATSYGEAMGDA 106
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 35.1 bits (77), Expect = 0.073
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 315 NLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL 494
NL + +G+GI+A+PA K G G+ ++ + + LLV++ SR A PS
Sbjct: 37 NLSTTIVGAGIMALPATMKVLGLAPGLVAILLAALLTDASIELLVRS----SRAAGAPSY 92
Query: 495 G 497
G
Sbjct: 93 G 93
>07_03_0546 -
19325526-19326054,19327109-19327631,19327898-19328152,
19328283-19328472,19328473-19328525,19329295-19329555,
19329670-19329720,19329873-19330121,19330225-19330453,
19332245-19332559
Length = 884
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 553 FQELHGYLSTGQWLLLFLALVLYMSFYLWS 642
F + G ++ G W+LL A VLY+ Y+W+
Sbjct: 579 FSSVLGSVADGSWVLLVFAAVLYLIMYIWN 608
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 33.1 bits (72), Expect = 0.29
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Frame = +3
Query: 333 LGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETV 512
+GSG+LA+P + G ++G ++ YI + LL + V + Y + V
Sbjct: 70 IGSGVLALPWSVAQMGWVLGPIALVVCAYITYYTAVLLCDCYRTPDPVHGKRNYTYMDVV 129
Query: 513 EAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVD---YFY---- 671
+ GP+ + + A + GA Y I S+ +V + Y
Sbjct: 130 RS--CLGPRDV--------VVCGIAQYAILWGAMVGYTITTATSIMSVVRTNCHHYKGPD 179
Query: 672 ADNGINETMYCLMFLVPILIFTQIKNLKYLAPFSGFANIL 791
A G + TMY ++F + ++ +Q +L+ + S A ++
Sbjct: 180 ATCGSSGTMYMVLFGLAEVVLSQCPSLEGVTLISVVAAVM 219
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 31.9 bits (69), Expect = 0.68
Identities = 33/160 (20%), Positives = 68/160 (42%)
Frame = +3
Query: 312 ANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPS 491
A+++ + +GSG+L++ A G +VG ++ I + LL + V+ +
Sbjct: 51 AHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLLADCYRTGDPVSGKRN 110
Query: 492 LGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFY 671
Y + V A + G Q + A+ +TI + + + + +
Sbjct: 111 YTYMDAV-AAYLGGWQVWSCGVFQYVNLVGTAIGYTITASISAAAVHKANCYHK--NGHD 167
Query: 672 ADNGINETMYCLMFLVPILIFTQIKNLKYLAPFSGFANIL 791
AD G+ +T Y ++F V + F+ + N L+ S A ++
Sbjct: 168 ADCGVYDTTYMIVFGVVQIFFSMLPNFSDLSWLSILAAVM 207
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 681 GINETMYCL-MFLVPILIFTQIKNLKYLAPFSGFANILLVLTFLICLYY 824
G+ ++ L +FL P+ F +I K F G + +L LICL+Y
Sbjct: 13 GLAGNIFALALFLSPVTTFKRILKAKSTERFDGLPYLFSLLNCLICLWY 61
>01_05_0586 + 23443371-23444645
Length = 424
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 303 RSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAK 482
R+ NL + G G+L+MP A G + + +++G +C + L+ + + +A
Sbjct: 41 RTCLNLTNAVSGIGVLSMPYAVSQGGWL-SLLLFVLVGAVCYYTGTLIERCMRADGSIAS 99
Query: 483 VPSLG 497
P +G
Sbjct: 100 YPDIG 104
>11_01_0643 -
5174154-5174254,5174296-5174346,5174611-5174739,
5174869-5175118,5175220-5177157
Length = 822
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 364 RSRMQERLLAFSGQLFWVTFARTAFICW*KHRKMYH 471
RS+++E L+A+SGQ W + IC + + YH
Sbjct: 630 RSKLEELLVAYSGQHPWEPRYKLDLICGVEEPQSYH 665
>06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478
Length = 393
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 327 SSLGSGILAMPAAFKNAGTI-VGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLG 497
+S G GIL+MP A G + + IF I + IC + LL + S V P +G
Sbjct: 3 TSQGVGILSMPYALSQGGWLSLAIF--ITIAAICFYTGILLQRCIDSSSLVKTYPDIG 58
>08_01_0211 -
1675189-1675439,1675520-1675784,1675903-1675982,
1676992-1677799
Length = 467
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Frame = +3
Query: 636 VESVQQIVDYFYADNGINETMYCLMFL----VPILIFTQIKNL----------KYLAPFS 773
V ++Q +D + ++ IN+++Y L FL +P+ I T + + K A
Sbjct: 347 VTTLQASLDSWQSEQ-INKSLYYLSFLSIIFLPLSIVTGVFGMNVGGVPWTEQKNPANLD 405
Query: 774 GFANILLVLTFLICLYYICNEFPDLDS 854
GF N++L+ ++ + +C FP L S
Sbjct: 406 GFFNVMLICVVILLILLLCFLFPSLYS 432
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +3
Query: 300 VRSFANLLKSSLGSGILAMPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVA 479
V + A+++ + +GSG+L++ A G ++G + I C LL + V
Sbjct: 44 VTASAHIITAVIGSGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSLLADCYRSPDPVH 103
Query: 480 KVPSLGYAETVEA 518
+ Y + V A
Sbjct: 104 GKRNYTYGQAVRA 116
>01_03_0016 + 11673258-11673854
Length = 198
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 565 HGYLSTGQWLLLFLALVLYMSFYLWSQFSR 654
HG TG +++ +ALVL + Y W FSR
Sbjct: 32 HGRALTGCLVVVNVALVLLVYLYFWRVFSR 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,260,897
Number of Sequences: 37544
Number of extensions: 428392
Number of successful extensions: 1355
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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