Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_M04
(849 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 5e-43
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 1e-35
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 118 6e-27
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 102 3e-22
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22) 99 5e-21
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 93 3e-19
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 76 3e-14
SB_36064| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5) 58 1e-08
SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96) 50 2e-06
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 43 4e-04
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 31 0.89
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36905| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 29 4.8
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 29 6.3
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 6.3
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 29 6.3
SB_4502| Best HMM Match : SpoIIIAC (HMM E-Value=2.8) 26 7.5
SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17) 28 8.3
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 183 bits (445), Expect = 2e-46
Identities = 90/181 (49%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Frame = +3
Query: 315 HSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 494
H+ + R++L LP++ + + + Q +++VGETGSGKTTQIPQ+ E +
Sbjct: 44 HTHASSPIQRQKLSLPIFSARKSLITEIRNRQNVIIVGETGSGKTTQIPQYLYE----AK 99
Query: 495 LGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGML 674
+ + +ACTQPRRVAA+S+AQRV+ EM V LG+EVGY++RFED + +T +KYMTDGML
Sbjct: 100 VARNSVIACTQPRRVAAISIAQRVSREMGVQLGEEVGYTVRFEDVTSTKTRIKYMTDGML 159
Query: 675 LREAMSDPMLXQYXVILLDEAHERTLATDILMGVLKXVIKQRSD-----LKLVIMSATLX 839
LRE++ D +L +Y VI+LDEAHERT+ TD+L G++K R D LK+V+MSATL
Sbjct: 160 LRESIGDSLLKRYSVIILDEAHERTIHTDVLFGIVKGAQISRKDKGMLPLKIVVMSATLE 219
Query: 840 A 842
A
Sbjct: 220 A 220
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 171 bits (417), Expect = 5e-43
Identities = 80/145 (55%), Positives = 114/145 (78%)
Frame = +3
Query: 336 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 515
++++R GLP+++ +++ ++ ++ +Q ++++GETGSGKTTQI Q+ E ++ GK +
Sbjct: 271 IIQQREGLPIFKLRDELVKAVHQNQVLIVIGETGSGKTTQITQYLAEQGFLTQ-GK---L 326
Query: 516 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSD 695
ACTQPRRVAAMSVA+RV+EE LGQEVGY+IRFEDC+ P+T +KYMTDG LLRE + D
Sbjct: 327 ACTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGFLLRECLID 386
Query: 696 PMLXQYXVILLDEAHERTLATDILM 770
P L QY VI+LDEAHER + TD+L+
Sbjct: 387 PELKQYSVIMLDEAHERVIHTDVLL 411
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 147 bits (356), Expect = 1e-35
Identities = 77/176 (43%), Positives = 119/176 (67%), Gaps = 4/176 (2%)
Frame = +3
Query: 321 QRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 500
+R E+ RL LP+ + M ++ + ++L GETGSGKTTQ+PQ+ E +G
Sbjct: 282 EREPEIQAARLQLPILAEEQAIMEAISENNVVILCGETGSGKTTQVPQFLYE----AGYT 337
Query: 501 KAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLR 680
K + T+PRRVAA+S++QRVA+EM + + V Y IR++ + +T++K+MTDG++L+
Sbjct: 338 KRGLIGITEPRRVAAVSMSQRVAKEMSMPTSK-VSYQIRYQGNTSDETVIKFMTDGVMLK 396
Query: 681 EAMSDPMLXQYXVILLDEAHERTLATDILMGVLKXVI----KQRSDLKLVIMSATL 836
E D +L +Y V+++DEAHER++ TDIL+G+L ++ KQ + LKLVIMSATL
Sbjct: 397 EVEKDFLLSKYSVVVIDEAHERSVYTDILIGLLSRIVPLRAKQGNKLKLVIMSATL 452
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 118 bits (284), Expect = 6e-27
Identities = 61/132 (46%), Positives = 82/132 (62%)
Frame = +3
Query: 441 GKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRF 620
GKTTQIPQ+ ++ G + CTQPRR++AMSVA+RVA E LG VG+ +R
Sbjct: 3 GKTTQIPQFILDSYLEREKGAGCNIICTQPRRISAMSVAERVAAERAEKLGDSVGFKVRL 62
Query: 621 EDCSGPQTLLKYMTDGMLLREAMSDPMLXQYXVILLDEAHERTLATDILMGVLKXVIKQR 800
E T L Y T G+LLR SD L +++DE HERT +D LM VL+ +I +R
Sbjct: 63 ESKQSSSTRLLYCTTGILLRYFESDSTLAGVSHVVVDEVHERTEESDFLMMVLRDLIMER 122
Query: 801 SDLKLVIMSATL 836
DL++++MSATL
Sbjct: 123 PDLRVILMSATL 134
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 102 bits (245), Expect = 3e-22
Identities = 49/97 (50%), Positives = 71/97 (73%)
Frame = +3
Query: 336 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 515
L+++R LP++ + + + ++ +Q +++VGETGSGKTTQ+ Q+ E G +
Sbjct: 602 LVQQRQYLPIFAVRQELLSIVRDNQVVIIVGETGSGKTTQLTQYMHE----DGYTNYGMI 657
Query: 516 ACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFED 626
CTQPRRVAAMSVA+RV+EEMD +LG+EVGY+IRFED
Sbjct: 658 GCTQPRRVAAMSVAKRVSEEMDCSLGEEVGYAIRFED 694
>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
Length = 354
Score = 98.7 bits (235), Expect = 5e-21
Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Frame = +3
Query: 456 IPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVA-EEMDVALGQEVGYSIRFED-C 629
+ Q+ ++ A G G +ACTQPRR++A+SVA+RVA E + G VGY IR E
Sbjct: 1 VAQFILDDAIQCGNGSLCRIACTQPRRISAISVAERVAIERGEQCGGGSVGYQIRLESRL 60
Query: 630 SGPQTLLKYMTDGMLLREAMSDPMLXQYXVILLDEAHERTLATDILMGVLKXVIKQRSDL 809
+ + Y T G+L R +SDP L +++DE HER L +D L+ +++ ++ +R DL
Sbjct: 61 PRSRGSIIYCTTGVLQRWLVSDPFLKSTSHVIIDEIHERDLMSDFLLIIIRDLLPRRPDL 120
Query: 810 KLVIMSATLXA 842
KLV+MSATL A
Sbjct: 121 KLVLMSATLNA 131
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 97.5 bits (232), Expect = 1e-20
Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Frame = +3
Query: 357 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 536
LP+ Y ++ + + + V+ G TGSGKTTQ+PQ+ ++ A + + TQPRR
Sbjct: 74 LPITSYHHEIVNTIENNSACVIFGPTGSGKTTQVPQYILDHYAKQR--RYCNILVTQPRR 131
Query: 537 VAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMLXQYX 716
+AA+S+A+RV +E D LG +GY I + C T L Y+T G+LL++ +S + Q+
Sbjct: 132 IAAVSIAKRVCQERDCPLGSLIGYQIGRDKCVSEDTRLAYVTTGVLLQKLISAKNMNQFT 191
Query: 717 VILLDEA--HERTLATDI 764
+++DE TL +D+
Sbjct: 192 HVIIDEVVLMSATLESDL 209
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 93.1 bits (221), Expect = 3e-19
Identities = 42/99 (42%), Positives = 67/99 (67%)
Frame = +3
Query: 327 YHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKA 506
+ +L +R LPV+ YK+ ++ ++ ++ I++ G TG GKTTQ+PQ+ ++ +G G
Sbjct: 297 FKAMLEQRSQLPVFNYKHAILQAVHENRVIIIKGATGCGKTTQVPQFVLDAFLENGQGAE 356
Query: 507 KGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFE 623
+ TQPRR++A+SVA+RVA E ALG VGYS+RF+
Sbjct: 357 CNIVVTQPRRISAVSVAERVAAERSEALGNSVGYSVRFD 395
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 85.4 bits (202), Expect = 5e-17
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = +3
Query: 651 KYMTDGMLLREAMSDPMLXQYXVILLDEAHERTLATDILMGVLKXVIKQRSDLKLVIMSA 830
+YMTDGMLLRE + +P L Y V+++DEAHERTL TDIL G++K + + R D+KL+I SA
Sbjct: 181 QYMTDGMLLREFLGEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPDIKLIISSA 240
Query: 831 TLXAGK 848
TL A K
Sbjct: 241 TLDADK 246
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +3
Query: 348 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVE 476
R LPV+ Y+ + + ++ HQ +++ GETGSGKTTQIPQ+ E
Sbjct: 126 RRSLPVYGYREELLEAISEHQVLIIEGETGSGKTTQIPQYLYE 168
>SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 82.2 bits (194), Expect = 5e-16
Identities = 41/115 (35%), Positives = 68/115 (59%)
Frame = +3
Query: 333 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 512
+L R + LP+ +++ + + HQ +++ G+TG GK+TQ+PQ+ + +G +
Sbjct: 162 KLKRDQTNLPISQFRQQIVDAVKNHQVVIIAGDTGCGKSTQVPQYLLH----AGFTE--- 214
Query: 513 VACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLLKYMTDGMLL 677
+ACTQPRR+A +S+A+RV E G EV Y IRFE T + ++T+ LL
Sbjct: 215 IACTQPRRIACISLAKRVGFETLNEYGSEVAYQIRFEGSKTSATRILFLTEACLL 269
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 76.2 bits (179), Expect = 3e-14
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 318 SQRYH-ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 494
S R++ E R LP++ K+ ++ + +Q VL+GETGSGK+TQI Q+ + +G
Sbjct: 709 SNRFNREKRRLESALPIYARKSQIIQTIKDNQVTVLIGETGSGKSTQIGQYLYD----AG 764
Query: 495 LGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGY 608
L + CTQPR+VAA S+AQ+V+ EM +G+ VGY
Sbjct: 765 LADKGQIVCTQPRKVAATSLAQQVSREMGQKVGKLVGY 802
>SB_36064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +3
Query: 546 MSVAQRVAEEMDVALGQEVGYSIRFEDCSGPQTLL 650
MSVAQRVA+E+DV LGQEVGY+IRFEDC+GP+T L
Sbjct: 1 MSVAQRVADELDVTLGQEVGYTIRFEDCTGPRTAL 35
>SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 256
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 456 IPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDVALGQEVGYSIRFE 623
+PQ+ ++ +G G + TQPRR++A+SVA+RVA E ALG VGYS+RF+
Sbjct: 1 VPQFVLDAFLENGQGAECNIVVTQPRRISAVSVAERVAAERSEALGNSVGYSVRFD 56
>SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96)
Length = 363
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 639 QTLLKYMTDGMLLREAMS-DPMLXQYXVILLDEAHERTLATDILMGVLKXVIKQRSDLKL 815
+TLL Y T+G+LLR M D L I++DE HER +D L+ L+ ++ ++KL
Sbjct: 63 KTLLTYCTNGVLLRTLMQGDNSLSFITHIIVDEIHERDRFSDFLLISLRELLSFNKNIKL 122
Query: 816 VIMSATL 836
V+MSA L
Sbjct: 123 VLMSAAL 129
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3
Query: 552 VAQRVAEEMDVALGQEVGYSIRFEDCSGPQ 641
VA RVAEE D GQEVGY +RF DC P+
Sbjct: 2 VAIRVAEERDTFAGQEVGYCVRFNDCFDPK 31
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 387 MRLLNTHQCIVLVGETGSGKT 449
MR N QCI++ GE+GSGKT
Sbjct: 101 MRDHNKDQCIIITGESGSGKT 121
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 384 FMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 494
FM+ QC+++ GE+G+GKT AAVSG
Sbjct: 90 FMKRELHDQCVIISGESGAGKTESTKLILQYLAAVSG 126
>SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 348 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKT 449
RLGL Y + + T+ CI G TG GKT
Sbjct: 40 RLGLDSCHYNSTCVNTYGTYHCICNPGYTGDGKT 73
>SB_36905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 708 QYXVILLDEAHERTLATDILMGVLKXVIKQRSDLKLVIMSATL 836
QY VILL+EAH +A +L+ LK + R + K+ ++SAT+
Sbjct: 211 QY-VILLNEAHNCLMAVVVLLLNLKFLRLLRFNRKISMLSATV 252
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 387 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 515
M+ + CI++ GE+GSGKT AA++ L K K +
Sbjct: 89 MKRRSEDTCIMISGESGSGKTEASKIIMRYIAAITNLSKQKEI 131
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 414 IVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 533
+ ++G GSGKTT + + + G K++G C P+
Sbjct: 440 VAVIGAVGSGKTTLLSAILGQVSCTKGKIKSRGTICHVPQ 479
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 396 LNTHQCIVLVGETGSGKTTQI 458
+N + ++LVGETG+GKT+ +
Sbjct: 444 INQQEPVLLVGETGTGKTSSV 464
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 297 KYTGLPHSQRYHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTT 452
K G H H + +RL + VW R L + ++LVGETG GKTT
Sbjct: 1176 KVPGFGHVVWTHNM--RRLAVLVW-------RALQFGEPVLLVGETGCGKTT 1218
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +3
Query: 384 FMRLLNTH--QCIVLVGETGSGKT 449
F R+L QCIV+ GE+GSGKT
Sbjct: 223 FYRMLKEKKSQCIVISGESGSGKT 246
>SB_4502| Best HMM Match : SpoIIIAC (HMM E-Value=2.8)
Length = 82
Score = 26.2 bits (55), Expect(2) = 7.5
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 248 NYQYDYHHGYQY 283
N+++DYHH YQY
Sbjct: 47 NHRHDYHHLYQY 58
Score = 21.0 bits (42), Expect(2) = 7.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 257 YDYHHGYQYT 286
Y+YHH +YT
Sbjct: 67 YNYHHNRKYT 76
>SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17)
Length = 1189
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 405 HQCIVLVGETGSGKTTQIPQWSVEFAAVSG 494
+QC+V+ GE+G+GKT AVSG
Sbjct: 918 NQCVVISGESGAGKTESTKFILQYLTAVSG 947
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,997,437
Number of Sequences: 59808
Number of extensions: 555702
Number of successful extensions: 1336
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -