Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M04
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    24   5.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   6.7  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   8.9  

>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -3

Query: 160 SIRRLDILINHKTRISINSWALLIFSS---ILTKPTKWRHAECERII 29
           S + LD++ N +T+  +  W LL+  +      +P ++ H     +I
Sbjct: 219 SPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLI 265


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 8   PMLLRCFNYSLALGVSPFCW 67
           P+L + FN SLA G  P  W
Sbjct: 578 PILAKLFNASLANGYFPKAW 597


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 682 RLCLTQCXNNIXLYSSMKPTKGHLQRIS*WVFS 780
           RLCL Q  NNI +  S++     +Q +  ++++
Sbjct: 134 RLCLPQIFNNILMDFSVEQINRSIQELMIYLYN 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,122
Number of Sequences: 2352
Number of extensions: 18144
Number of successful extensions: 65
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)