Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_M03
(832 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 302 8e-81
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 297 2e-79
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 294 2e-78
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 293 4e-78
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 292 8e-78
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 291 2e-77
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 288 1e-76
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 274 2e-72
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 270 3e-71
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 262 8e-69
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 252 8e-66
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 248 2e-64
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 247 2e-64
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 244 3e-63
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 241 1e-62
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 231 1e-59
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 231 1e-59
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 229 5e-59
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 222 7e-57
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 218 1e-55
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 218 1e-55
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 213 3e-54
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 210 3e-53
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 208 1e-52
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 206 7e-52
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 203 5e-51
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 197 2e-49
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 192 7e-48
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 188 2e-46
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 184 2e-45
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 177 3e-43
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 176 5e-43
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 169 7e-41
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 168 2e-40
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 161 3e-38
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 159 1e-37
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 158 1e-37
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 151 2e-35
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 150 5e-35
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 144 2e-33
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 138 2e-31
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 137 3e-31
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 133 4e-30
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 133 6e-30
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 132 8e-30
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 132 1e-29
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 131 2e-29
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 130 4e-29
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 129 1e-28
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 128 1e-28
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 128 2e-28
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 126 9e-28
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 125 1e-27
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 124 2e-27
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 122 8e-27
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 120 6e-26
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 118 2e-25
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 117 4e-25
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 115 1e-24
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 115 2e-24
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 111 2e-23
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 111 3e-23
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 109 1e-22
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 108 1e-22
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 107 3e-22
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 107 3e-22
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 106 6e-22
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 105 1e-21
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 105 1e-21
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 105 2e-21
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 103 4e-21
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 103 5e-21
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 102 1e-20
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 101 2e-20
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 100 5e-20
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 99 7e-20
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 99 7e-20
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 97 4e-19
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 96 1e-18
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 95 1e-18
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 95 2e-18
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 94 4e-18
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 93 6e-18
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 93 6e-18
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 91 2e-17
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 89 2e-16
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 87 7e-16
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 86 9e-16
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 85 2e-15
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 84 5e-15
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 81 3e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 3e-14
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 79 1e-13
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 1e-11
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 70 6e-11
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 69 1e-10
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 67 4e-10
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 67 6e-10
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 59 2e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 59 2e-07
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 57 5e-07
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 53 8e-06
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 47 7e-04
UniRef50_Q6EGM1 Cluster: Cytochrome c oxidase subunit I; n=1; Br... 46 9e-04
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 45 0.003
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 41 0.033
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 41 0.033
UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=... 39 0.13
UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1; Pi... 37 0.54
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.6
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.9
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.9
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 3.8
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 34 5.0
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 5.0
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 33 6.6
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 302 bits (741), Expect = 8e-81
Identities = 152/261 (58%), Positives = 180/261 (68%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ G +G+IGT+L LLIRAELG PG+L+GDDQIYN IVTAHAF++ GG
Sbjct: 19 LYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGG 78
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+A
Sbjct: 79 FGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLA 138
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 139 HAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLL 198
Query: 586 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 765
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+
Sbjct: 199 SLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHV 258
Query: 766 ISQERGKKETFGCLGIIYAIL 828
++ GKKE FG +G+++A+L
Sbjct: 259 VTYYAGKKEPFGYMGMVWAML 279
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 297 bits (729), Expect = 2e-79
Identities = 147/261 (56%), Positives = 177/261 (67%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ G +G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHAF++ GG
Sbjct: 18 LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGG 77
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+A
Sbjct: 78 FGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLA 137
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 138 HAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLL 197
Query: 586 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 765
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHV 257
Query: 766 ISQERGKKETFGCLGIIYAIL 828
++ GKKE FG +G+++A++
Sbjct: 258 VAYYAGKKEPFGYMGMVWAMM 278
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 294 bits (722), Expect = 2e-78
Identities = 146/262 (55%), Positives = 178/262 (67%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXG 222
++++ G+ SG++G S+ L+IR ELG PGSLIG+DQIYN+IVT+HAFI+ G
Sbjct: 1 MLYFMFGMWSGMLGFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIG 60
Query: 223 GFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 402
GFGN L+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS +
Sbjct: 61 GFGNWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLIL 120
Query: 403 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 582
H G SVDL IFSLHLAG SS + D++ LF +V ITA
Sbjct: 121 GHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLL 180
Query: 583 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 762
AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH
Sbjct: 181 LSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISH 240
Query: 763 IISQERGKKETFGCLGIIYAIL 828
+I E GKKETFG LG+IYA+L
Sbjct: 241 MIFNESGKKETFGMLGMIYAML 262
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 293 bits (719), Expect = 4e-78
Identities = 144/261 (55%), Positives = 177/261 (67%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ G +G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHAF++ GG
Sbjct: 18 LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGG 77
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+A
Sbjct: 78 FGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLA 137
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 138 HAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLL 197
Query: 586 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 765
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHV 257
Query: 766 ISQERGKKETFGCLGIIYAIL 828
++ GKKE FG +G+++A++
Sbjct: 258 VTYYAGKKEPFGYMGMVWAMM 278
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 292 bits (716), Expect = 8e-78
Identities = 144/261 (55%), Positives = 177/261 (67%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ G +G++GT+L LLIRAELG PG+L+G+D IYN IVTAHAF++ GG
Sbjct: 18 LYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGG 77
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +
Sbjct: 78 FGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYS 137
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 138 HPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLL 197
Query: 586 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 765
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHI 257
Query: 766 ISQERGKKETFGCLGIIYAIL 828
++ GKKE FG +G+++A++
Sbjct: 258 VTYYSGKKEPFGYMGMVWAMM 278
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 291 bits (713), Expect = 2e-77
Identities = 147/226 (65%), Positives = 162/226 (71%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
+++ GI +G++GTSL LLIRAELG PGSLIGDDQIYNTIVTAHAFI+ GG
Sbjct: 15 LYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGG 74
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIA
Sbjct: 75 FGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIA 134
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 135 HGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLL 194
Query: 586 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 723
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 195 SLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
Score = 38.7 bits (86), Expect = 0.18
Identities = 17/22 (77%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
Frame = +2
Query: 2 RK*IYSTNHKDIGTLYFI--VW 61
RK +YSTNHKDIGTLYFI +W
Sbjct: 1 RKWLYSTNHKDIGTLYFIFGIW 22
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 288 bits (706), Expect = 1e-76
Identities = 146/220 (66%), Positives = 157/220 (71%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
++GTSL LLIR ELG PGSLIGDDQIYNTIVTAHAFI+ GGFGN L+PL+L
Sbjct: 1 MVGTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLML 60
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
GAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAI
Sbjct: 61 GAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAI 120
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
FSLHLAGISS SFDQ+PLF+ AVGITA AGAIT
Sbjct: 121 FSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAIT 180
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 735
+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 181 MLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 274 bits (671), Expect = 2e-72
Identities = 137/263 (52%), Positives = 172/263 (65%), Gaps = 2/263 (0%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAFIIXXXXXXXXXX 219
+++ G +G++GT +LIR EL PG I G+ Q+YN ++TAHAF++
Sbjct: 19 LYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 78
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS
Sbjct: 79 GGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGI 138
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
+H G +VDLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 139 TSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLL 198
Query: 580 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIIS
Sbjct: 199 LLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIIS 258
Query: 760 HIISQERGKKETFGCLGIIYAIL 828
HI+S G K FG LG++YA++
Sbjct: 259 HIVSTFSG-KPVFGYLGMVYAMI 280
Score = 34.3 bits (75), Expect = 3.8
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 11 IYSTNHKDIGTLYFI 55
++STNHKDIGTLYFI
Sbjct: 8 LFSTNHKDIGTLYFI 22
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 270 bits (662), Expect = 3e-71
Identities = 138/262 (52%), Positives = 169/262 (64%), Gaps = 2/262 (0%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
++ + + +IGT+ +LIR EL PG L GD Q+YN I+TAHAF++
Sbjct: 16 LYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMV 75
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS
Sbjct: 76 GGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGL 135
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
+H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 136 QSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILL 195
Query: 580 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++S
Sbjct: 196 LLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVS 255
Query: 760 HIISQERGKKETFGCLGIIYAI 825
HI+S G K FG LG++YA+
Sbjct: 256 HIVSAFSG-KPVFGYLGMVYAM 276
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 262 bits (642), Expect = 8e-69
Identities = 132/263 (50%), Positives = 171/263 (65%), Gaps = 2/263 (0%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
++ G SG++G + +LIR EL P + L+G+ QIYN ++TAHAF++
Sbjct: 24 LYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMI 83
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS
Sbjct: 84 GGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSI 143
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
+H G +VDLAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 144 QSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLL 203
Query: 580 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+IS
Sbjct: 204 LLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMIS 263
Query: 760 HIISQERGKKETFGCLGIIYAIL 828
HI+S +K FG +G++YA++
Sbjct: 264 HIVS-TFSRKPVFGYIGMVYAMV 285
Score = 33.9 bits (74), Expect = 5.0
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 11 IYSTNHKDIGTLYFIVWVF 67
I+STNHKDIGTLY I F
Sbjct: 13 IFSTNHKDIGTLYLIFGAF 31
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 252 bits (617), Expect = 8e-66
Identities = 130/263 (49%), Positives = 166/263 (63%), Gaps = 2/263 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
++++ L I SG+ GT++ L+IR EL PGS L G+ Q++N +V HA ++
Sbjct: 16 VLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPAL 75
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 396
GGFGN L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS
Sbjct: 76 IGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSS 135
Query: 397 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 576
AH G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 136 IQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFL 195
Query: 577 XXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 756
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGII
Sbjct: 196 LLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGII 255
Query: 757 SHIISQERGKKETFGCLGIIYAI 825
SH++S KK FG + ++YA+
Sbjct: 256 SHVVS-TYSKKPVFGEISMVYAM 277
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 248 bits (606), Expect = 2e-64
Identities = 127/264 (48%), Positives = 166/264 (62%), Gaps = 2/264 (0%)
Frame = +1
Query: 40 NIIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXX 213
+I+++ L + SG+ G+++ ++IR EL PGS L G+ Q++N +V HA ++
Sbjct: 15 SIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPA 74
Query: 214 XXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 393
GGFGN ++PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLS
Sbjct: 75 LIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLS 134
Query: 394 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 573
S AH G SVDLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 135 SIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAF 194
Query: 574 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 753
+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI
Sbjct: 195 LLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGI 254
Query: 754 ISHIISQERGKKETFGCLGIIYAI 825
+SHI+S KK FG + ++YA+
Sbjct: 255 VSHIVS-TYSKKPVFGEISMVYAM 277
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 247 bits (605), Expect = 2e-64
Identities = 130/262 (49%), Positives = 159/262 (60%), Gaps = 1/262 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
+++ + +G+IGT+ +LIR EL PG I D+Q+YN+I+TAHA I+
Sbjct: 17 VLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALI 76
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPLS
Sbjct: 77 GGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGI 136
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
+H G SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 137 QSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLL 196
Query: 580 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS
Sbjct: 197 LLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIIS 256
Query: 760 HIISQERGKKETFGCLGIIYAI 825
IS K FG LG++YA+
Sbjct: 257 TTIS-ANSNKSVFGYLGMVYAM 277
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 244 bits (596), Expect = 3e-63
Identities = 125/263 (47%), Positives = 160/263 (60%), Gaps = 1/263 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
I++ + SG++GT+ +LIR EL PG I D+Q+YN+I+T+H I+
Sbjct: 43 ILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALI 102
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS
Sbjct: 103 GGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGI 162
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
+H VDL IF LHL+GISS +L LF AV ITA
Sbjct: 163 QSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLL 222
Query: 580 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS
Sbjct: 223 LLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIIS 282
Query: 760 HIISQERGKKETFGCLGIIYAIL 828
+IS K FG LG++YA++
Sbjct: 283 TVIS-ANSNKNVFGYLGMVYAMM 304
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 241 bits (591), Expect = 1e-62
Identities = 123/218 (56%), Positives = 142/218 (65%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ LGI SG+IGT+L LLIR ELG PGS IG+DQ+YN +VTAHAF++ GG
Sbjct: 1 LYLILGIWSGLIGTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGG 60
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN LVPL+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N A
Sbjct: 61 FGNWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTA 120
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVDLAIFSLHLAG+SS + + LFV +V ITA
Sbjct: 121 HAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLL 180
Query: 586 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 699
AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 181 SLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 231 bits (566), Expect = 1e-59
Identities = 125/214 (58%), Positives = 144/214 (67%)
Frame = -3
Query: 698 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 519
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 518 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 339
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 338 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXIIIKACAVTIV 159
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP II KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 158 L*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPK 57
L I S PI PG PNSARIKSL DVP +P PK
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPK 212
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 231 bits (566), Expect = 1e-59
Identities = 117/222 (52%), Positives = 141/222 (63%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ G SG IGT+ +LIR EL +PGS++GDD +YN IVTAHAF++ GG
Sbjct: 19 LYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGG 78
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S A
Sbjct: 79 FGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQA 138
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 139 HSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLL 198
Query: 586 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 711
AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 199 SLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 229 bits (561), Expect = 5e-59
Identities = 121/264 (45%), Positives = 150/264 (56%), Gaps = 2/264 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
I++ G+ +G + L +L+R EL PG L G+ YN I T H ++
Sbjct: 19 ILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPIL 78
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 396
GGFGN VP+++GAPD++FPR+NN F E G GTG TVYPPLSS
Sbjct: 79 FGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSS 138
Query: 397 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 576
+H G SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 139 LQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFL 198
Query: 577 XXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 756
A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++
Sbjct: 199 VIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLV 258
Query: 757 SHIISQERGKKETFGCLGIIYAIL 828
SHII+ KK FG + +I A+L
Sbjct: 259 SHIIA-TFSKKRVFGHVPMIAAML 281
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 222 bits (543), Expect = 7e-57
Identities = 119/266 (44%), Positives = 156/266 (58%), Gaps = 5/266 (1%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAFIIXXXXXXXXXXG 222
++ + SG++GT+ +LIR EL PG I ++Q+YN+I+TAHA ++ G
Sbjct: 46 LYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIG 105
Query: 223 GFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPL 390
GFGN L+PL++G PD+AFPR+NNI F I+E G GTG T+ YPPL
Sbjct: 106 GFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPL 165
Query: 391 SSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 570
S +H G SVDLAIF+LHL+G+SS +L LF
Sbjct: 166 SGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALF-------G 218
Query: 571 FXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 750
+ IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFG
Sbjct: 219 WATWSSRSRYFLGITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFG 278
Query: 751 IISHIISQERGKKETFGCLGIIYAIL 828
IIS IS K FG +G++YA++
Sbjct: 279 IISTTISSS-SNKPIFGYIGMVYAMM 303
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 218 bits (533), Expect = 1e-55
Identities = 112/264 (42%), Positives = 158/264 (59%), Gaps = 2/264 (0%)
Frame = +1
Query: 40 NIIFYCLGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAFIIXXXXXXXX 213
+I++ + SG++G SL +L+R EL NP L+ + Q++N ++TAHA +
Sbjct: 32 SILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPI 91
Query: 214 XXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 393
G N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+
Sbjct: 92 TMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLT 151
Query: 394 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 573
S +H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 152 SLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAV 211
Query: 574 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 753
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG+
Sbjct: 212 LIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGV 271
Query: 754 ISHIISQERGKKETFGCLGIIYAI 825
+S I+ Q KK FG +G+IYA+
Sbjct: 272 VSQIV-QVYAKKPIFGKIGMIYAM 294
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 218 bits (533), Expect = 1e-55
Identities = 112/264 (42%), Positives = 158/264 (59%), Gaps = 2/264 (0%)
Frame = +1
Query: 40 NIIFYCLGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAFIIXXXXXXXX 213
+I++ + SG++G SL +L+R EL NP L+ + Q++N ++TAHA +
Sbjct: 32 SILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPI 91
Query: 214 XXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 393
G N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+
Sbjct: 92 TMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLT 151
Query: 394 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 573
S +H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 152 SLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAV 211
Query: 574 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 753
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG+
Sbjct: 212 LIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGV 271
Query: 754 ISHIISQERGKKETFGCLGIIYAI 825
+S I+ Q KK FG +G+IYA+
Sbjct: 272 VSQIV-QVYAKKPIFGKIGMIYAM 294
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 213 bits (521), Expect = 3e-54
Identities = 111/220 (50%), Positives = 135/220 (61%), Gaps = 2/220 (0%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
++ + + +IGT+ +LIR EL PG L GD Q+YN I+TAHAF++
Sbjct: 16 LYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMV 75
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS
Sbjct: 76 GGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGL 135
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
+H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 136 QSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILL 195
Query: 580 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 699
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 196 LLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 210 bits (513), Expect = 3e-53
Identities = 125/281 (44%), Positives = 159/281 (56%), Gaps = 20/281 (7%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPG-------SLIGD------DQIY---NTIVTAH 177
++ I +GIIG ++ L+RAEL PG + D DQ Y N ++TAH
Sbjct: 42 LYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNVLITAH 101
Query: 178 AFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE-- 351
I+ GGFGN VP+++GAPD+AFPR+NNI F V
Sbjct: 102 GLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGG 161
Query: 352 --NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 525
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 162 TGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMT 220
Query: 526 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 705
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF F
Sbjct: 221 LHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWF 280
Query: 706 FGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAIL 828
FGHPEVYI+ILPGFGIIS I+S +K FG LG+ YA++
Sbjct: 281 FGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMV 320
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 208 bits (509), Expect = 1e-52
Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 2/243 (0%)
Frame = +1
Query: 106 RAELGNPGSLIG--DDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFP 279
+A LG L G D ++N ++T H ++ GGFGN +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 280 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 459
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 460 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 639
SS + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNF 321
Query: 640 NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIY 819
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK FG L ++Y
Sbjct: 322 GTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVY 380
Query: 820 AIL 828
A++
Sbjct: 381 ALV 383
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 206 bits (502), Expect = 7e-52
Identities = 109/234 (46%), Positives = 140/234 (59%), Gaps = 2/234 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
++++ L I SG+ GT++ L+IR EL PGS L G+ Q++N +V HA ++
Sbjct: 16 VLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPAL 75
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 396
GGFGN L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS
Sbjct: 76 IGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSS 135
Query: 397 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 576
AH G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 136 IQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFL 195
Query: 577 XXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 738
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 196 LLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 203 bits (495), Expect = 5e-51
Identities = 106/205 (51%), Positives = 127/205 (61%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ G +G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHAF++ GG
Sbjct: 7 LYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGG 66
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+A
Sbjct: 67 FGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLA 126
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 585
H G SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 127 HAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLL 186
Query: 586 XXXXXAGAITILLTDRNLNTSFFDP 660
A IT+LLTDRNLNT+FFDP
Sbjct: 187 SLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 197 bits (481), Expect = 2e-49
Identities = 102/225 (45%), Positives = 135/225 (60%), Gaps = 2/225 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
++++ L + SG+ GT++ L+IR EL PG L G++Q++N +V HA ++
Sbjct: 16 VLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPAL 75
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 396
GGFGN ++PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S
Sbjct: 76 IGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLAS 135
Query: 397 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 576
AH G SVDLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 136 IQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVL 195
Query: 577 XXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 711
+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 196 LLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 192 bits (469), Expect = 7e-48
Identities = 99/260 (38%), Positives = 143/260 (55%), Gaps = 1/260 (0%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
I+ +G+ SG+ G SL +R EL +PG + +Y++I+T HAF++ GG
Sbjct: 20 IYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGG 79
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
GN +PL++ D++ PR+NN+ + G G G T+YPPLS++
Sbjct: 80 LGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEF 139
Query: 406 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXX 582
G +DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 140 MDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLV 199
Query: 583 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 762
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISH
Sbjct: 200 TSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISH 259
Query: 763 IISQERGKKETFGCLGIIYA 822
I+ + K FG +G+ +A
Sbjct: 260 ILCRSSAKLHVFGKIGMSWA 279
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 188 bits (457), Expect = 2e-46
Identities = 100/234 (42%), Positives = 133/234 (56%), Gaps = 2/234 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
++++ + S +IGT L +IR EL N GS L G+ Q +N ++TAHA ++
Sbjct: 21 VLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPAL 80
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 396
GGFGN L+PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+
Sbjct: 81 VGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAG 140
Query: 397 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 576
+H G +VDLAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 141 IQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAIL 200
Query: 577 XXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 738
A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 201 LLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 184 bits (448), Expect = 2e-45
Identities = 98/260 (37%), Positives = 135/260 (51%), Gaps = 2/260 (0%)
Frame = +1
Query: 49 FYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXXXG 222
+ LG +G+ G+ L +LIR EL +PG G Q+YN+++T H ++ G
Sbjct: 28 YIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIG 87
Query: 223 GFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 402
GFGN ++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 88 GFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE- 146
Query: 403 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 582
S+D I LH GI S + DQ+ +FV +T+F
Sbjct: 147 GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLV 206
Query: 583 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 762
AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS
Sbjct: 207 LSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISE 266
Query: 763 IISQERGKKETFGCLGIIYA 822
+ K FG + +A
Sbjct: 267 AVLFLTDKDRLFGQTSMTFA 286
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 177 bits (431), Expect = 3e-43
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 2/264 (0%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
+ + + I SG +G L IR EL G L GD Q YN ++T+H I+
Sbjct: 18 LCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVM 77
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 396
GG N +P++ G PD+ FPR+NN+ F + E G G G T+YP L
Sbjct: 78 MGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLIC 137
Query: 397 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 576
H + D +F++HL GISS SF LF+ A ITA
Sbjct: 138 IDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAIL 197
Query: 577 XXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 756
AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+I
Sbjct: 198 LIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLI 257
Query: 757 SHIISQERGKKETFGCLGIIYAIL 828
S I+ + G + F + +IY+++
Sbjct: 258 STIV-EVIGFRCVFSTVAMIYSMI 280
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 176 bits (429), Expect = 5e-43
Identities = 93/237 (39%), Positives = 135/237 (56%), Gaps = 4/237 (1%)
Frame = +1
Query: 40 NIIFYCLGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAFIIXXXXXXXX 213
+I++ + SG++G SL +L+R EL NP L+ + Q++N ++TAHA +
Sbjct: 32 SILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPI 91
Query: 214 XXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 393
G N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+
Sbjct: 92 TMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLT 151
Query: 394 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 573
S +H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 152 SLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAV 211
Query: 574 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 738
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 212 LIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 169 bits (411), Expect = 7e-41
Identities = 94/240 (39%), Positives = 135/240 (56%), Gaps = 2/240 (0%)
Frame = +1
Query: 40 NIIFYCLGI*SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAFIIXXXXXXXX 213
+I++ + SG++G SL +L+R EL NP L+ + Q++N ++TAHA +
Sbjct: 32 SILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPI 91
Query: 214 XXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 393
G N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+
Sbjct: 92 TMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLT 151
Query: 394 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 573
S +H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 152 SLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAV 211
Query: 574 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 753
A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 212 LIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 168 bits (408), Expect = 2e-40
Identities = 99/261 (37%), Positives = 130/261 (49%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXG 222
++++ G+ G IG L LLIR L +P + +YN +VT H + G
Sbjct: 115 LLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIG 174
Query: 223 GFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 402
GFGN +P+ L D+ PR+N++ G G G T+YPPLS
Sbjct: 175 GFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-W 231
Query: 403 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 582
G VD +FSLHLAG+SS S + V A T+
Sbjct: 232 EGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLL 286
Query: 583 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 762
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SH
Sbjct: 287 LSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSH 346
Query: 763 IISQERGKKETFGCLGIIYAI 825
I +FG G+I A+
Sbjct: 347 ICMSLSNNDSSFGYYGLICAM 367
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 161 bits (390), Expect = 3e-38
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +1
Query: 247 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 426
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 427 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 606
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 714
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 159 bits (385), Expect = 1e-37
Identities = 88/237 (37%), Positives = 125/237 (52%), Gaps = 4/237 (1%)
Frame = +1
Query: 73 GIIGTSLRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAFIIXXXXXXXXXXGGFGN*LV 243
G G L +++R EL + +I + + YN I T H I+ GGFGN +
Sbjct: 29 GSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFL 88
Query: 244 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-S 420
P++ G+P++A+PRIN+I E G GTG T+YPPLS+++ +
Sbjct: 89 PILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVA 148
Query: 421 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 600
VD+ IF L ++G++S + L + ++ IT+
Sbjct: 149 VDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVL 208
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 771
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 209 TGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 158 bits (384), Expect = 1e-37
Identities = 92/254 (36%), Positives = 131/254 (51%), Gaps = 3/254 (1%)
Frame = +1
Query: 73 GIIGTSLRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LV 243
G+IG + +LIR EL G +I D +IYN + T H I+ GG GN L
Sbjct: 32 GMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLY 91
Query: 244 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 423
P++LG D+ +PR+N +E G+GTG T+YPPLS+++++ G +
Sbjct: 92 PVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--I 149
Query: 424 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 603
D IF L AGI+S D++ ++ +T+F
Sbjct: 150 DFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVT 209
Query: 604 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 783
++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 210 AVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLSTYT- 268
Query: 784 KKETFGCLGIIYAI 825
KE FG +I A+
Sbjct: 269 TKEMFGNQTMILAM 282
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 151 bits (367), Expect = 2e-35
Identities = 83/189 (43%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
++ + + +IGT+ +LIR EL PG L GD Q+YN I+TAHAF++
Sbjct: 16 LYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMV 75
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS
Sbjct: 76 GGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGL 135
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
+H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 136 QSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILL 195
Query: 580 XXXXXXXAG 606
AG
Sbjct: 196 LLSLPVLAG 204
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 150 bits (363), Expect = 5e-35
Identities = 88/243 (36%), Positives = 124/243 (51%)
Frame = +1
Query: 40 NIIFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
+++++ LGI S ++G S LL R +L P L D +YN VT H ++
Sbjct: 13 SLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAI 70
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
G F N L+P PD+ FPR+N + F ++ + A G T YPPLSS
Sbjct: 71 GFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS- 124
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
SV+ ++FSLHLAGI+S + L LF ++ + +
Sbjct: 125 ---LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLL 179
Query: 580 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S
Sbjct: 180 VLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFS 239
Query: 760 HII 768
I
Sbjct: 240 SSI 242
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 144 bits (349), Expect = 2e-33
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 6/268 (2%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGSLI----GDDQIYNTIVTAHAFIIXXXXXXX 210
I++ +G +GI+G + +LIR EL G I + IYN +T H I+
Sbjct: 23 ILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMP 82
Query: 211 XXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPP 387
G +GN L+P+++G +++ PR+N I F ++ +G T+YPP
Sbjct: 83 VGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPP 142
Query: 388 LSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 564
LS+ A G ++DL++ +H+ GISS +F + ++ ++ +
Sbjct: 143 LSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIV 202
Query: 565 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 744
T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP
Sbjct: 203 TSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPV 260
Query: 745 FGIISHIISQERGKKETFGCLGIIYAIL 828
FG+ S I++ K+ FG G++Y I+
Sbjct: 261 FGLTSLILTSII-HKDIFGREGMMYCII 287
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 138 bits (334), Expect = 2e-31
Identities = 94/270 (34%), Positives = 136/270 (50%), Gaps = 8/270 (2%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXG 222
+++ G+ + +G + +L+R EL +PG + + YN+++T+H I
Sbjct: 99 LLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFLFATPIIA 157
Query: 223 GFGN*LVPLILGAPDIAFPRINNIRFXXX--XXXXXXXXXXXIVEN-GAGTG*TVYPPLS 393
F N L+PL++GA D+AFPRIN I F I E A TG T+Y PLS
Sbjct: 158 AFSNYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLS 217
Query: 394 -----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 558
N A+ G VDL + LHL+G+S+ S+ L +F +
Sbjct: 218 VGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTI 275
Query: 559 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 738
+ AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++L
Sbjct: 276 LTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVL 333
Query: 739 PGFGIISHIISQERGKKETFGCLGIIYAIL 828
P GIIS+I+ + G++ FG ++Y+ L
Sbjct: 334 PPMGIISYILPRFSGRR-LFGFKFVVYSTL 362
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 137 bits (332), Expect = 3e-31
Identities = 87/266 (32%), Positives = 127/266 (47%), Gaps = 1/266 (0%)
Frame = +1
Query: 34 YWNIIFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXX 213
+W ++F+ +G GI LLIR EL PG I D YN T H ++
Sbjct: 51 FWVLLFFLVG---GIFA----LLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPA 103
Query: 214 XXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 393
FGN ++PL+LGA D+AFPR+N + ++ G TG T Y P S
Sbjct: 104 IPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYS 162
Query: 394 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 573
AH +V +F + G SS ++ ++PLFV A+ T+
Sbjct: 163 ---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATSC 219
Query: 574 XXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 750
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG
Sbjct: 220 IQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFG 278
Query: 751 IISHIISQERGKKETFGCLGIIYAIL 828
++S +++ +K FG + Y+ L
Sbjct: 279 VMSEVVA-TYSRKNIFGYRAVAYSSL 303
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 133 bits (322), Expect = 4e-30
Identities = 84/251 (33%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Frame = +1
Query: 79 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILG 258
+G + LLIRAEL PG ++ +N + T H ++ G F N ++PL +G
Sbjct: 55 LGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWG-FANYVLPLQIG 113
Query: 259 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAI 435
APD+AFPR+N F + GA G T+Y PLS I G D+ I
Sbjct: 114 APDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWI 173
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ GI S + ++P+F + + + A
Sbjct: 174 VGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAAL 233
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 795
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K
Sbjct: 234 GVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPM 291
Query: 796 FGCLGIIYAIL 828
FG +G+I+A L
Sbjct: 292 FGYVGLIFATL 302
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 133 bits (321), Expect = 6e-30
Identities = 77/234 (32%), Positives = 113/234 (48%)
Frame = +1
Query: 124 PGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFX 303
PG + D + YN ++T H + GGFGN L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 304 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 483
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 484 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 663
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 664 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAI 825
GGDP++YQ++F F+ HP VY+ +LP FG S II ++ FG +++A+
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVFARRPLFGYTSMVFAV 232
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 132 bits (320), Expect = 8e-30
Identities = 78/250 (31%), Positives = 115/250 (46%)
Frame = +1
Query: 79 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILG 258
+G LLIR EL PG I D YN + T H ++ GFGN L+P+++G
Sbjct: 52 LGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIG 111
Query: 259 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 438
A D+AFP++N + F +V+ GA TG T Y P S+ + V L F
Sbjct: 112 AKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAF 170
Query: 439 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 618
L G SS + +LPLFV ++ T+ ++ +
Sbjct: 171 IL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLL 227
Query: 619 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 798
+ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +K F
Sbjct: 228 VAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIF 286
Query: 799 GCLGIIYAIL 828
G + Y+ L
Sbjct: 287 GYKAVAYSSL 296
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 132 bits (318), Expect = 1e-29
Identities = 83/251 (33%), Positives = 119/251 (47%), Gaps = 19/251 (7%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNP-------GSLI-GDDQI-----YNTIVTAHAFIIXXXXXXXXX 216
++G +L +LIR + G P G L+ G+ + Y I T H ++
Sbjct: 47 LVGGALAMLIRWQWGFPYRPVPLVGRLLFGESGVIGPATYQQIFTTHGLVMIFFAVTPVL 106
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS 393
G FGN L+PL++GA D+AFPR+N F G AG G T Y PLS
Sbjct: 107 IGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLS 166
Query: 394 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 573
+N+ G L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 167 TNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAI 226
Query: 574 XXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILIL 738
A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+IL
Sbjct: 227 LNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMIL 286
Query: 739 PGFGIISHIIS 771
P +GI+ ++S
Sbjct: 287 PAWGILGDVLS 297
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 131 bits (317), Expect = 2e-29
Identities = 86/250 (34%), Positives = 113/250 (45%)
Frame = +1
Query: 79 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILG 258
IG S +R EL P ++YN ++T H I+ F N L+PL++G
Sbjct: 44 IGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAA-FANYLIPLMVG 102
Query: 259 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 438
D+AFPR+N + F V G T YPPLS G +L I
Sbjct: 103 TEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWIL 159
Query: 439 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 618
SL L G SS +PLF A+ T+ A A+ +
Sbjct: 160 SLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALIL 219
Query: 619 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 798
L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 220 LSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIF 278
Query: 799 GCLGIIYAIL 828
G I Y+ L
Sbjct: 279 GYRAIAYSSL 288
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 130 bits (314), Expect = 4e-29
Identities = 77/230 (33%), Positives = 107/230 (46%)
Frame = +1
Query: 79 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILG 258
+G LL+R +L P + +++N + T H + G F N VPL++G
Sbjct: 49 VGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTG-FANYFVPLMIG 107
Query: 259 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 438
A D+AFPR+N+ F + + G Y PLSS + VD I
Sbjct: 108 ARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWII 167
Query: 439 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 618
L + GI S S ++PLFV + + A A+ +
Sbjct: 168 GLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAM 227
Query: 619 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 228 LLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 129 bits (311), Expect = 1e-28
Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Frame = +1
Query: 97 LLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAF 276
LL+R EL + +YN ++T+H I FGN +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHG-ITMLFLFGTPMIAAFGNYFIPLLIDADDMAF 149
Query: 277 PRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 450
PRIN I F ++ A T T+Y PLS ++ +VD+ + LHL
Sbjct: 150 PRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHL 207
Query: 451 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 630
G+S+ + L +F + + A+ +LL D
Sbjct: 208 TGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLD 267
Query: 631 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 810
RN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K FG
Sbjct: 268 RNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKF 325
Query: 811 IIYAIL 828
++Y+ L
Sbjct: 326 VVYSTL 331
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 128 bits (310), Expect = 1e-28
Identities = 68/140 (48%), Positives = 85/140 (60%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
+++ GI SG++GTSL L+IR ELG PGSL+ DDQ+YN +VTAH FI+ GG
Sbjct: 2 LYFIFGIWSGLLGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGG 61
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIA 405
FGN LVPL+LGAPD+AFPR+NN+ F + G + PL
Sbjct: 62 FGNWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTI 119
Query: 406 HRGRSVDLAIFSLHLAGISS 465
G SVDLAIF LHLAG+SS
Sbjct: 120 SAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 128 bits (308), Expect = 2e-28
Identities = 77/245 (31%), Positives = 113/245 (46%), Gaps = 3/245 (1%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
++G L +++R EL P + + D +YN + T H ++ GF N L+P ++
Sbjct: 52 LVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPIL-NGFNNLLIPTMI 110
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVD 426
GAPD+AFP++N F G A +G YPP+S + + H
Sbjct: 111 GAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEF 170
Query: 427 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 606
L I ++ L+GISS F ++P+FV G
Sbjct: 171 LWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTG 230
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 786
+LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +
Sbjct: 231 GAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYAR 289
Query: 787 KETFG 801
K FG
Sbjct: 290 KPLFG 294
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 126 bits (303), Expect = 9e-28
Identities = 64/111 (57%), Positives = 77/111 (69%)
Frame = +1
Query: 61 GI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*L 240
G +G+IGT+L LLIRAELG PG+L+GDDQ N IVTAHAF++ GGFGN L
Sbjct: 24 GAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWL 83
Query: 241 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 393
VPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 84 VPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 125 bits (302), Expect = 1e-27
Identities = 88/267 (32%), Positives = 123/267 (46%), Gaps = 15/267 (5%)
Frame = +1
Query: 73 GIIGTSLRLLIRAELGNPGSL-IGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPL 249
G++ L L+R +LG PG+ D Y +T H I+ GGFGN L+PL
Sbjct: 53 GLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPL 112
Query: 250 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRS 420
++GA D+ FP +N + + V G G G T+YPP + S +
Sbjct: 113 MVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWG 172
Query: 421 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXX 597
+ L + SL L I + +LPL V + T
Sbjct: 173 IVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPAL 232
Query: 598 XAGAITILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGF 747
G++ +LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP F
Sbjct: 233 FVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAF 291
Query: 748 GIISHIISQERGKKETFGCLGIIYAIL 828
GI+S +IS +K FG +++AI+
Sbjct: 292 GIVSDLIS-THARKNIFGYRMMVWAIV 317
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 124 bits (300), Expect = 2e-27
Identities = 81/249 (32%), Positives = 111/249 (44%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
+IG LL+R +LG P + +YN + T H + G GN +VPL++
Sbjct: 47 LIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVG-LGNYMVPLMI 105
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
GA D+AFPR+N + V G Y PL+ VD I
Sbjct: 106 GARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWI 165
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ L G++S + +++PLFV + AF A
Sbjct: 166 VGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATI 225
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 795
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K
Sbjct: 226 QLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPI 284
Query: 796 FGCLGIIYA 822
FG + Y+
Sbjct: 285 FGYAFVAYS 293
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 122 bits (295), Expect = 8e-27
Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Frame = +1
Query: 79 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
+G L LL+R +L P + IG D+ YN I T H + LVPL++
Sbjct: 46 LGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQA-MAIYLVPLMV 103
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
G IAFPR+N + V+ G G Y PLS G+ D+
Sbjct: 104 GTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWA 163
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ +S+ S D++PLFV ++ +T+F A T
Sbjct: 164 QMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIAST 223
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 795
L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ ++
Sbjct: 224 SLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPV 282
Query: 796 FGCLGIIYAIL 828
FG L ++ A++
Sbjct: 283 FGYLAMVMALI 293
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 120 bits (288), Expect = 6e-26
Identities = 78/239 (32%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
+I SL LL R +L P S Y VT H I+ G N +VPL +
Sbjct: 37 LIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFG-LANYIVPLQI 95
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLA 432
GA D+AFPR+N + + E+GA G T+Y PL++ I G +DLA
Sbjct: 96 GARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLA 155
Query: 433 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 612
++ L +S + ++P+F ++ T
Sbjct: 156 ALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGG 215
Query: 613 TILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 786
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 216 ALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 118 bits (283), Expect = 2e-25
Identities = 75/244 (30%), Positives = 109/244 (44%)
Frame = +1
Query: 97 LLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAF 276
L++RA+L P + D YN I T H I+ G N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 277 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 456
P +NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 457 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 636
I + + ++P+F IT A+ +L DR
Sbjct: 195 IGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRL 254
Query: 637 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGII 816
FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ FG ++
Sbjct: 255 FGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMV 313
Query: 817 YAIL 828
+I+
Sbjct: 314 GSII 317
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 117 bits (281), Expect = 4e-25
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Frame = +1
Query: 97 LLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAF 276
LLIR +L P + + YN I+T H + GFGN +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 277 PRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 453
PR+N + GA G T Y P S A VD + ++ L
Sbjct: 107 PRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLL 163
Query: 454 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 633
G SS S ++P++V +V + A ++L +R
Sbjct: 164 GFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLER 223
Query: 634 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGI 813
+ S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K FG +
Sbjct: 224 KIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYRQM 282
Query: 814 IYA 822
++A
Sbjct: 283 VWA 285
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 115 bits (277), Expect = 1e-24
Identities = 75/241 (31%), Positives = 113/241 (46%), Gaps = 15/241 (6%)
Frame = +1
Query: 148 QIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 327
+ Y +VT HA ++ G FGN L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 328 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 495
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 496 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 660
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 661 ------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYA 822
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K FG ++Y+
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYS 324
Query: 823 I 825
I
Sbjct: 325 I 325
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 115 bits (276), Expect = 2e-24
Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 11/271 (4%)
Frame = +1
Query: 34 YWNIIFYCLGI*SGIIGTSLRLLIRAELGN--PGSLIGD---DQIYNTIVTAHAFIIXXX 198
Y I++ L I + ++ + +R + N PGS + D + +Y ++ H +
Sbjct: 16 YIGILYILLSIINFVLAGIAAMYMRLTIANTPPGSPVQDPFNELLYTWFMSLHGLGMLLL 75
Query: 199 XXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*T 375
G N LVP ++GAPD+ +PRIN + F + ++G G T
Sbjct: 76 FAMQAVAGA-ANILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWT 134
Query: 376 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555
+YPPLS+ + VDL + + +AG SS + LF +
Sbjct: 135 LYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWS 192
Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPE 720
V + A +LL +R+L FF DPA GDP L+QH+F FFGHPE
Sbjct: 193 VLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPE 252
Query: 721 VYILILPGFGIISHIISQERGKKETFGCLGI 813
VYIL+LP G++S +I Q ++ +G I
Sbjct: 253 VYILVLPAMGLVSEVI-QRMARRRAYGYTAI 282
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 111 bits (268), Expect = 2e-23
Identities = 67/251 (26%), Positives = 112/251 (44%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
++G + IR +L P + Q YN ++T H + N +VPL +
Sbjct: 40 LVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFA-LMNAVVPLQI 98
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
GA D++FP +N + F + G T Y LS + +G +D +
Sbjct: 99 GARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFV 156
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
L ++G+ + ++ +LPLF + + +
Sbjct: 157 LGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLA 216
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 795
+++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K
Sbjct: 217 LMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRL 275
Query: 796 FGCLGIIYAIL 828
FG +++AI+
Sbjct: 276 FGYSSMVFAIV 286
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 111 bits (266), Expect = 3e-23
Identities = 74/251 (29%), Positives = 111/251 (44%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
I+G L LL+R +L P + D + YN + + H I GF ++PL+L
Sbjct: 52 ILGVILALLMRLQLAVPENDFMDPETYNQVFSMHG-ITMMFLFAIPVMEGFAVYIIPLML 110
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
G D+ FPR+N + ++ G YPPL+ G +D
Sbjct: 111 GTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYT 170
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ IS+ S +++P+FV AV + +F A
Sbjct: 171 TVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASL 230
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 795
+L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II ++
Sbjct: 231 MLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPI 288
Query: 796 FGCLGIIYAIL 828
FG + I+ +I+
Sbjct: 289 FGYIPIVLSIV 299
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 109 bits (261), Expect = 1e-22
Identities = 71/223 (31%), Positives = 100/223 (44%)
Frame = +1
Query: 154 YNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 333
Y+ I TAH I+ G N +VPL +GA D+AFP +N++ F
Sbjct: 100 YDQIFTAHGVIMIIFMAMPFMTG-LMNIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVN 158
Query: 334 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 513
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 159 LSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRA 218
Query: 514 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 693
+P+F GA+ +L DR L+ FF GG+ ++Y +
Sbjct: 219 PGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLN 278
Query: 694 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYA 822
LF +GHPEVYIL+LP FGI S ++S GK+ FG +IYA
Sbjct: 279 LFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYA 320
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 108 bits (260), Expect = 1e-22
Identities = 69/231 (29%), Positives = 100/231 (43%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
++G L +LIRA+L P S + YN + T H I+ G F L+P +L
Sbjct: 45 VVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEG-FAVYLLPKLL 103
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
G+ D+AFPR+ F + +G +YPPLSS + G + D +
Sbjct: 104 GSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWL 163
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ IS+ S ++P+F +TA
Sbjct: 164 IGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSI 223
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 107 bits (257), Expect = 3e-22
Identities = 75/208 (36%), Positives = 89/208 (42%)
Frame = +1
Query: 82 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGA 261
G L R L G +IG QI VTA A ++ GGFG L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 262 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 441
P +A PR+ N+ F + G G VYPP SS +AH +VDL IF
Sbjct: 80 PXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFX 139
Query: 442 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 621
LHLAGISS ++ LF A AIT+L
Sbjct: 140 LHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITML 199
Query: 622 LTDRNLNTSFFDPAGGGDPILYQHLF*F 705
R N SFF P G P + F F
Sbjct: 200 XXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 107 bits (257), Expect = 3e-22
Identities = 46/65 (70%), Positives = 56/65 (86%)
Frame = +1
Query: 634 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGI 813
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E FG LG+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 814 IYAIL 828
+YA++
Sbjct: 251 VYAMI 255
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 106 bits (255), Expect = 6e-22
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 3/245 (1%)
Frame = +1
Query: 46 IFYCLG-I*SGIIGTSLRLLIRAELGNPGSLIGDD-QIYNTIVTAHAFIIXXXXXXXXXX 219
I Y +G I + + + +LIR EL G I DD +YNT + H +
Sbjct: 19 ILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALT 78
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
G F N +PL++GA D+AFPR+N + + + T YPP S
Sbjct: 79 GFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI- 137
Query: 400 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 579
I H + FS+ L G +S +++L +FV A + AF
Sbjct: 138 ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVL 194
Query: 580 XXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 756
G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++
Sbjct: 195 QLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMV 254
Query: 757 SHIIS 771
I++
Sbjct: 255 FEIVA 259
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 105 bits (252), Expect = 1e-21
Identities = 80/260 (30%), Positives = 118/260 (45%), Gaps = 14/260 (5%)
Frame = +1
Query: 91 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDI 270
LR ++ + G L + + Y +VT H I+ G F N L+PL +GA D+
Sbjct: 83 LRPILGGWITEAGKL--EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDM 140
Query: 271 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIF 438
A +N + + +E G +G +YPPLS+ ++ G + + +
Sbjct: 141 ASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLI 200
Query: 439 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 618
S+ L IS SF +LPL + A ITA A +
Sbjct: 201 SMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALL 260
Query: 619 LLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S +I
Sbjct: 261 LIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVI 320
Query: 769 SQERGKKETFGCLGIIYAIL 828
+ +K FG +I +IL
Sbjct: 321 A-TNARKPIFGYKAMIGSIL 339
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 105 bits (252), Expect = 1e-21
Identities = 67/237 (28%), Positives = 103/237 (43%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
+I LL+R +L P + + YN + T H I+ G F L+PL++
Sbjct: 71 LIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEG-FAVYLIPLMI 129
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
GA D+ FPR+ + + + G +Y PLS++ G S D +
Sbjct: 130 GARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWL 189
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ LA I+S S ++P+ + + TAF
Sbjct: 190 IGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSI 249
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 786
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 105 bits (251), Expect = 2e-21
Identities = 70/223 (31%), Positives = 97/223 (43%)
Frame = +1
Query: 154 YNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 333
Y+ I TAH I+ G N VPL +GA D+AFP +N++ F
Sbjct: 99 YDQIFTAHGVIMIIFMAMPFFTG-LMNLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVN 157
Query: 334 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 513
V A TG YPPL+ G VD I++L L+G+ +
Sbjct: 158 ISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRA 217
Query: 514 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 693
+P+F A+ +L DR L+ F GG+P++Y +
Sbjct: 218 PGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVN 277
Query: 694 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYA 822
LF +GHPEVYILILP FG+ S + S GK+ FG +IYA
Sbjct: 278 LFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYA 319
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 103 bits (248), Expect = 4e-21
Identities = 73/231 (31%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Frame = +1
Query: 79 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
+G +L LLIRAEL PG+ I D +N + T H + GN VP+++
Sbjct: 37 LGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASA-VGNYFVPIMV 95
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
D+A+P++N I F + T PP S I+ G + D+ I
Sbjct: 96 RYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWI 149
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
F L + GISS S Q+PL + ++ A A+
Sbjct: 150 FGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALL 209
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
+LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 210 MLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 103 bits (247), Expect = 5e-21
Identities = 65/228 (28%), Positives = 99/228 (43%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
++G L++R +L P + + Y+++ T H + GF N L PL+L
Sbjct: 65 LLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHG-VTMIFLYALPVLSGFANYLWPLML 123
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
G+ D+AFPR+ + + G Y PL+S G ++D+
Sbjct: 124 GSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYG 183
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ L GIS+ S D+LP+ V + + A
Sbjct: 184 LGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFL 243
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
+L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 244 LLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 102 bits (244), Expect = 1e-20
Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGG 225
++ LGI + IIG+ LIR +L +L D Y VT H + G
Sbjct: 22 MYIVLGIVALIIGSVNAALIRDQLSF-NNLNAVD--YYDAVTLHGIFMIFFVVMPLSTG- 77
Query: 226 FGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNI 402
F N LVP ++GA D+ +P+IN + F ++ G +Y PLS
Sbjct: 78 FANYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETT 136
Query: 403 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 582
+ G +L +L L+G+SS + ++PLFV TA
Sbjct: 137 VNYGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVWGFFTTAILMI 194
Query: 583 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 762
+ +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S
Sbjct: 195 IAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSE 254
Query: 763 IISQERGKKETFGCLGI 813
++ + ++E FG I
Sbjct: 255 LL-PKMARREIFGYTAI 270
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 101 bits (242), Expect = 2e-20
Identities = 54/121 (44%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXXX 219
++ + + +IGT+ +LIR EL PG L GD Q+YN I+TAHAF++
Sbjct: 16 LYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMV 75
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 399
GGFGN LVP+++GAPD+AFPR+NNI F VE GAGTG TV LS
Sbjct: 76 GGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQI 135
Query: 400 I 402
I
Sbjct: 136 I 136
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 100 bits (239), Expect = 5e-20
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +3
Query: 633 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 812
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 813 NLCY 824
NLCY
Sbjct: 67 NLCY 70
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 99 bits (238), Expect = 7e-20
Identities = 68/262 (25%), Positives = 107/262 (40%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXG 222
+++ + I +G L L IR +L P + YN ++T HA I+
Sbjct: 37 LLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLF 96
Query: 223 GFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 402
GFGN +PL LG D+A PR+N G T Y PL+ +
Sbjct: 97 GFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDG 156
Query: 403 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 582
G SV + L+ G+ S ++P+F ++ T+
Sbjct: 157 NQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQL 214
Query: 583 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 762
A + + L S F+P GG P+LYQ F F+ HP VY+++LP GI +
Sbjct: 215 LTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAE 274
Query: 763 IISQERGKKETFGCLGIIYAIL 828
+ S +K FG ++Y++L
Sbjct: 275 VAS-TMARKPLFGYRVMVYSML 295
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 99 bits (238), Expect = 7e-20
Identities = 66/231 (28%), Positives = 100/231 (43%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
+IG L +LIRA+L +P S + Y + T H I+ G L+P +L
Sbjct: 45 LIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEG-LTIYLLPKML 103
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
G+ D+A+PR++ F + +G +YPPL+S + G + D +
Sbjct: 104 GSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWL 163
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ IS+ S D++P++ +TA
Sbjct: 164 LGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSI 223
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 97.5 bits (232), Expect = 4e-19
Identities = 69/253 (27%), Positives = 107/253 (42%), Gaps = 4/253 (1%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
++G ++R +L PG + + +N + T HA + F N +PL++
Sbjct: 45 LVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSA-FMNYFLPLMI 103
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSV 423
GA D+AFPR+N + ++ G G Y L+S G
Sbjct: 104 GARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGP 163
Query: 424 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 603
D L L GI + + ++P+FV +T+
Sbjct: 164 DFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVT 223
Query: 604 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 783
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I
Sbjct: 224 VALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHA 282
Query: 784 KKETFGCLGIIYA 822
+K FG ++++
Sbjct: 283 RKMLFGYSVMVFS 295
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 95.9 bits (228), Expect = 1e-18
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAFIIXXXXXXXXXX 219
++ G +G++GT +LIR EL PG+ I G+ Q+YN ++TAHAF++
Sbjct: 20 LYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
Query: 220 GGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 378
GGFGN VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 80 GGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 95.5 bits (227), Expect = 1e-18
Identities = 66/232 (28%), Positives = 97/232 (41%), Gaps = 1/232 (0%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNP-GSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLI 252
I+ L L++R +L P L+G D YN I T H + G L+P +
Sbjct: 55 ILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLFAVPVVEA-LGVMLLPQM 112
Query: 253 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 432
L A D+ FPR++ + G +YPPL+ G + D
Sbjct: 113 LAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFW 172
Query: 433 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 612
+ + IS+ S ++P+F A+ I A A
Sbjct: 173 LLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILAT 232
Query: 613 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
+L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 233 MLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 95.1 bits (226), Expect = 2e-18
Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 16/233 (6%)
Frame = +1
Query: 118 GNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIR 297
G PG ++ + Y +++T H ++ FGN +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 298 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 462
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 463 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 642
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 643 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 93.9 bits (223), Expect = 4e-18
Identities = 71/246 (28%), Positives = 104/246 (42%), Gaps = 2/246 (0%)
Frame = +1
Query: 97 LLIRAE--LGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDI 270
+L+RA+ +G G + D + + + H I+ G N +VPL +GA D+
Sbjct: 99 VLMRAQGAVGLGGGFLSSDH-FAQLFSTHGTIMIFFMAMPFLTGLI-NYVVPLQIGARDV 156
Query: 271 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 450
AFP +N+I +V + G YPP + + + G VD I+SL L
Sbjct: 157 AFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNPGIGVDYWIWSLTL 216
Query: 451 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 630
A + S +PLF TA L D
Sbjct: 217 ASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAMPPLTVVTLQLALD 276
Query: 631 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 810
R L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K FG
Sbjct: 277 RYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKS 335
Query: 811 IIYAIL 828
+++A +
Sbjct: 336 LVWATI 341
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 93.5 bits (222), Expect = 6e-18
Identities = 66/225 (29%), Positives = 96/225 (42%)
Frame = +1
Query: 154 YNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 333
Y I TAH I+ G N ++PL +G+ D+AFP +N + F
Sbjct: 94 YCQIFTAHGDIMIFFVAMPMIIG-IMNIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLIN 152
Query: 334 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 513
I+ A TG YPPLS VD +S+ ++GI +
Sbjct: 153 ISLIIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRK 212
Query: 514 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 693
F+++ +F+ + + + DR L+T F+ GG +LY +
Sbjct: 213 KKLFFNKISIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYIN 272
Query: 694 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAIL 828
L +GHPEVYILILP FGI S IIS K F + +IYA +
Sbjct: 273 LIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATI 316
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 93.5 bits (222), Expect = 6e-18
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
++++ + S +IGT L +IR EL N GS L G+ Q +N ++TAHA ++
Sbjct: 21 VLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPAL 80
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 396
GGFGN L+PL+LGA D+AF R+NNI F +VE GAGTG TV SS
Sbjct: 81 VGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSS 140
Query: 397 NI 402
+
Sbjct: 141 KM 142
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 91.5 bits (217), Expect = 2e-17
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 14/240 (5%)
Frame = +1
Query: 148 QIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 327
+ Y + T HA ++ G FGN L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 328 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 498
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 499 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 666
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 667 -------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAI 825
GG P+L+QHLF F+ HP VYI++LP G++S ++S +K FG +++++
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSM 328
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 88.6 bits (210), Expect = 2e-16
Identities = 59/231 (25%), Positives = 97/231 (41%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
++ + L++R +L + +YN + T H ++ G L+P +L
Sbjct: 114 VLAGIVALMMRTQLAVAENDFIGPALYNQLFTMHGTVMMFLFAVPAVEA-MGILLLPNML 172
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 435
GA D+ FPR++ F V G + PPL++ G + D +
Sbjct: 173 GARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGYNADFWL 232
Query: 436 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 615
+ IS+ + ++P+F A+ + A A
Sbjct: 233 LGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPAVILATA 292
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
+L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 293 LLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 86.6 bits (205), Expect = 7e-16
Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFIIXXXXXXXXX 216
I+++ I G+ GT++ ++IR EL PG+ L G+ Q++N +V HA ++
Sbjct: 16 ILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPAL 75
Query: 217 XGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 378
GGFGN L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 76 IGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 86.2 bits (204), Expect = 9e-16
Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 13/251 (5%)
Frame = +1
Query: 76 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLIL 255
+ G L LL R EL + G+ + YN V+ H ++ G F N LVPL +
Sbjct: 38 VFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFG-FANYLVPLQI 96
Query: 256 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN--IAHRGRSVDL 429
GA D+AFPR+N + + G T+Y PL++ I G
Sbjct: 97 GADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIPGEGLGATS 156
Query: 430 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 609
+ +L + + +P+F ++ +T + A
Sbjct: 157 VVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAA 216
Query: 610 ITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 756
+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P G++
Sbjct: 217 LMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPALGVM 276
Query: 757 SHIISQERGKK 789
+ G++
Sbjct: 277 AECFQTFTGRR 287
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 85.0 bits (201), Expect = 2e-15
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +1
Query: 367 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 537
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 538 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 718 EVYILILPGFGIISHIISQERGKK 789
EVY+LI+P FG I+ I+ ++
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR 426
Score = 60.1 bits (139), Expect = 7e-08
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 70 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LV 243
+G+ G +L +IR EL +P S GD Y +VTAH I+ GGF N L+
Sbjct: 74 TGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLI 133
Query: 244 PLILGAPDIAFPRINNIRF 300
P +G+ D+A+PR+N+I F
Sbjct: 134 PYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 83.8 bits (198), Expect = 5e-15
Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 1/207 (0%)
Frame = +1
Query: 154 YNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 333
YN +VT H + G FG L+PL +G+ D+ +PR+N + +
Sbjct: 84 YNQLVTIHGLTMLIWFLGPLGTG-FGIYLIPLAIGSRDMIYPRMNALGYWLFLFSGIMLW 142
Query: 334 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 510
+ G TG TVY PLSS D A ++ L GI +
Sbjct: 143 SGFFLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKAR 202
Query: 511 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 690
LPLFV AV A G +LL ++ S++ GG ++++
Sbjct: 203 AKGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWE 261
Query: 691 HLF*FFGHPEVYILILPGFGIISHIIS 771
+LF +FGHPEVY+L+LPG G + +S
Sbjct: 262 NLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 81.0 bits (191), Expect = 3e-14
Identities = 58/223 (26%), Positives = 92/223 (41%)
Frame = +1
Query: 154 YNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 333
++ I ++H I+ G N +VPL +GA D+AFP +N +
Sbjct: 118 FDQIYSSHGVIMILLAVTPLLTG-LSNIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVM 176
Query: 334 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 513
V + + G PL+ G VD ++++ + + +
Sbjct: 177 LSLFVGDFSHDGWIGLIPLTELPYSPGVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRA 236
Query: 514 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 693
++ +LP V T A+ +L DR L T FF GG+ +LY +
Sbjct: 237 PGMTWSRLPFVVWTSLTTNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTN 296
Query: 694 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYA 822
LF +GHPEVY ++LP FG IS II +K FG ++ A
Sbjct: 297 LFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMVIA 338
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 247 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 426
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 427 LAIFS 441
LAI+S
Sbjct: 61 LAIYS 65
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 546 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 713
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 79.0 bits (186), Expect = 1e-13
Identities = 55/226 (24%), Positives = 90/226 (39%)
Frame = +1
Query: 91 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDI 270
L +L+R +L PG+ +N T H + L+P +LGA D+
Sbjct: 78 LAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFLFAVPMFEA-ISIILLPALLGARDL 136
Query: 271 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 450
FPR++ + + + +G +YPPL++ G D+ + L
Sbjct: 137 PFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSF 194
Query: 451 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 630
++S + +PL+ V + + +
Sbjct: 195 IEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPPLIAGDLLFEME 254
Query: 631 RNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 255 RGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 385 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 564
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 565 TAFXXXXXXXXXAGAITILLTDR 633
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 165 CNSTC--FYYNXXXSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFK 338
CN C F Y+ TYYNW IWKL P NK YKILT PL Y K
Sbjct: 8 CNCYCPRFCYDFFHGNTYYNWWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINK 67
Query: 339 KN 344
+N
Sbjct: 68 RN 69
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 70.1 bits (164), Expect = 6e-11
Identities = 49/165 (29%), Positives = 57/165 (34%)
Frame = +3
Query: 150 NL*YYCNSTCFYYNXXXSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYII 329
NL YC +C YN S TYYN I KL P NK +KIL TPL Y
Sbjct: 37 NLQRYCYCSCLRYNFLYSNTYYNSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTT 96
Query: 330 NFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXT 509
N C K C + +NSLP Y T R +F T
Sbjct: 97 NSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYA 156
Query: 510 XXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKY 644
CM +YS + S+YNI K KY
Sbjct: 157 RYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPKPKY 201
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 69.3 bits (162), Expect = 1e-10
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +1
Query: 703 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAIL 828
FFGHPEVYILILPGFG+ISHI++ GKKE FG +G+++A++
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMM 43
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 67.3 bits (157), Expect = 4e-10
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +3
Query: 690 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCY 824
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCY 46
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 66.9 bits (156), Expect = 6e-10
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 718 EVYILILPGFGIISHIISQERGKKETFGCLGIIYAIL 828
EVYILILPGFG+ISHIISQE GKKE FG LG+IYA++
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMM 191
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 343 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 465
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 58.8 bits (136), Expect = 2e-07
Identities = 54/227 (23%), Positives = 83/227 (36%), Gaps = 3/227 (1%)
Frame = +1
Query: 97 LLIRAELGNPGSL---IGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPD 267
+ IR EL P S + + Q YN H ++ GG G L+PL+LG +
Sbjct: 131 MAIRIELLTPDSTSWWLSEIQ-YNQTFGIHGLMMLLGVVASAIVGGVGYYLIPLMLGTRN 189
Query: 268 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 447
+ FP++ + + G TG YPPL+ N G + +
Sbjct: 190 VVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGSGIVWYVLGAA 245
Query: 448 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 627
++S S ++P+FV + A + L+
Sbjct: 246 TILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPATYTGALMDLS 305
Query: 628 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 768
D + F+ G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 306 DMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 529 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 708
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 709 GHPEVYILIL 738
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 57.2 bits (132), Expect = 5e-07
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAFII 189
I+++ I SG+IG+S+ +LIR EL GS++ +QIYNT+VT+HAFI+
Sbjct: 1 ILYFIFAIWSGLIGSSMSMLIRLELETCGSVLRSEQIYNTLVTSHAFIM 49
Score = 40.3 bits (90), Expect = 0.058
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 412 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 591
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 592 XXXAGAITILLTDRNLNT 645
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 53.2 bits (122), Expect = 8e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +1
Query: 703 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAIL 828
FFGHPEVY+LILP FGI+SHI FG G++ A+L
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAML 42
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 549 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 701
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFII 189
++++ L I SG+ GT++ L+IR EL PGS L G+ Q++N +V HA ++
Sbjct: 16 VLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
>UniRef50_Q6EGM1 Cluster: Cytochrome c oxidase subunit I; n=1;
Brotia episcopalis|Rep: Cytochrome c oxidase subunit I -
Brotia episcopalis
Length = 215
Score = 46.4 bits (105), Expect = 9e-04
Identities = 50/187 (26%), Positives = 66/187 (35%)
Frame = +1
Query: 124 PGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFGN*LVPLILGAPDIAFPRINNIRFX 303
PG+ ++ ++ I TA AF++ GGFG+ L PL A +AF NN+ F
Sbjct: 24 PGAACVVNRPFSVIATAPAFVMTFCWATPTTTGGFGSWLAPLTFVAAVMAFRPPNNMNFW 83
Query: 304 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 483
NGA T + L+ N+A +LAIF AG
Sbjct: 84 RLPAAAWPWRFWAAAVNGAVIVWTAFRALAKNLAPVVVFANLAIFFRRWAGALFIFVAAN 143
Query: 484 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 663
LFV V A A AI LT N N + + A
Sbjct: 144 FIMTAINMPWPVMPCKPPALFVWFVKTMAMAAWPLAAAPAVAIMTPLTVANCNMACCNRA 203
Query: 664 GGGDPIL 684
GG IL
Sbjct: 204 GGVVAIL 210
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAFII 189
++++ + S +IGT L +IR EL N GS L G+ Q +N ++TAHA ++
Sbjct: 21 VLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILM 71
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 41.1 bits (92), Expect = 0.033
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +3
Query: 561 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 740
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 741 RIWYNFSYYFTRKRKKRNFWLFRNNL 818
I ++ +K N ++NNL
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYKNNL 179
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 41.1 bits (92), Expect = 0.033
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIV 168
++++ L I SG+ GT++ L+IR EL PGS L G+ Q++N +V
Sbjct: 16 VLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=1;
Saccharomyces cerevisiae|Rep: Putative COX1/OXI3 intron
1 protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 834
Score = 39.1 bits (87), Expect = 0.13
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +1
Query: 43 IIFYCLGI*SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTA 174
++++ L I SG+ GT++ L+IR EL PGS L G+ Q++N T+
Sbjct: 16 VLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNGAPTS 61
>UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1;
Pichia guilliermondii|Rep: Cytochrome c oxidase subunit
1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 168
Score = 37.1 bits (82), Expect = 0.54
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 70 SGIIGTSLRLLIRAEL--GNPGSLIGDDQIYNTIVTAHAFIIXXXXXXXXXXGGFG 231
+ ++GT + ++IR EL GN G++Q YN ++T HA + G FG
Sbjct: 3 ASMVGTGMSVIIRMELSSGNSQFFHGNNQAYNVLITGHAIAMIFLFVMPVIIGAFG 58
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 667 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 783
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 715 PEVYILILPGFGIISHIISQERGKK 789
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.9
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 673 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 786
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 34.3 bits (75), Expect = 3.8
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +1
Query: 46 IFYCLGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 159
++ G +G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 20 LYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 33.9 bits (74), Expect = 5.0
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 721 VYILILPGFGIISHIISQERGKKETFGCLGIIYAIL 828
VY++ILP FG++SH + G + LG++YA++
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYAMI 35
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 5.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 679 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 786
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 33.5 bits (73), Expect = 6.6
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 49 FYCLGI*SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 159
+ G +G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 21 YLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,985,640
Number of Sequences: 1657284
Number of extensions: 12753975
Number of successful extensions: 28604
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 26420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28328
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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