Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M02
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -3

Query: 552 SHXFSLLCTNFTWNMFK--GPRSWCTIIVYFLYCLVSF 445
           S  F L+  N   + F+    +S+CT +   +YC V+F
Sbjct: 20  SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTF 57


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -3

Query: 534 LCTNFTWNMFKGPRSWCTIIVYFLYCLVSF 445
           +C NF +        +   + Y LYC  SF
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQLYCWSSF 554


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 225 KDKSVWFLDHDYLENMYGMFKKVNARXK 308
           K KS +   HD L N+Y   K V A  K
Sbjct: 6   KVKSYFTTHHDTLHNIYTSMKPVYAICK 33


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 225 KDKSVWFLDHDYLENMYGMFKKVNARXK 308
           K KS +   HD L N+Y   K V A  K
Sbjct: 6   KVKSYFTTHHDTLHNIYTSMKPVYAICK 33


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 174 GVLDVSNSFAVPFDEDDKDKSV 239
           G L+  ++ + P D+DDKD+ +
Sbjct: 225 GSLEDDDNISDPEDDDDKDQDM 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,795
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)