Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_M02
         (656 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2774| Best HMM Match : No HMM Matches (HMM E-Value=.)              122   2e-28
SB_21709| Best HMM Match : F5_F8_type_C (HMM E-Value=8.7e-21)          29   3.3  
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_31215| Best HMM Match : Acid_phosphat_A (HMM E-Value=2.6e-26)       28   7.7  
SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  

>SB_2774| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score =  122 bits (295), Expect = 2e-28
 Identities = 55/67 (82%), Positives = 61/67 (91%)
 Frame = +3

Query: 96  DHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMY 275
           DHFNRM K+G+QKRVVGVLLG  R KGVLDV+N FAVPFDEDD+D++VWFLDHDYLENMY
Sbjct: 23  DHFNRMGKVGSQKRVVGVLLGS-RRKGVLDVANCFAVPFDEDDRDQNVWFLDHDYLENMY 81

Query: 276 GMFKKVN 296
            MFKKVN
Sbjct: 82  AMFKKVN 88



 Score =  115 bits (277), Expect = 3e-26
 Identities = 55/86 (63%), Positives = 63/86 (73%)
 Frame = +1

Query: 397 VLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTFEHVPSEIXXXXXXXXXXXHLLRDI 576
           VLVIIDAKPKDL LPT+AY AVEEVHDDGTPT++TFEH+PSEI           HLLRDI
Sbjct: 109 VLVIIDAKPKDLRLPTDAYVAVEEVHDDGTPTTKTFEHIPSEIGAEEAEEVGVEHLLRDI 168

Query: 577 XDTTVGSLSQRITNQXXXXXXXHSQL 654
            + T G+LSQRITNQ       H++L
Sbjct: 169 KNLTAGTLSQRITNQLTSLKGLHARL 194


>SB_21709| Best HMM Match : F5_F8_type_C (HMM E-Value=8.7e-21)
          Length = 532

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 195 SFAVPFDEDDKDKSVW--FLDHDYLENMYGMFKKVNAR 302
           S++V F ED   K  W  +++ DYL+   G   KVN R
Sbjct: 482 SYSVSFSED---KKTWQKYVERDYLQKAMGAITKVNQR 516


>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 222 RLHQTGLRSCSIRLRHPWLSNNPIEHRLLVSDSR 121
           R HQT +R  S  +RH   S++ I H    SDSR
Sbjct: 57  RHHQTFIRHSSDIIRHHQTSSDIIRHHQTSSDSR 90


>SB_31215| Best HMM Match : Acid_phosphat_A (HMM E-Value=2.6e-26)
          Length = 448

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +3

Query: 96  DHFNRM-SKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLD-HDYLEN 269
           D FN   S+I + K V+G+ L C     V + S+S+   F   D D   +F D   Y + 
Sbjct: 236 DLFNLQGSEIIHVKHVIGMYLACTFEVAVYNRSDSWCSVFRPSDLDVLEYFYDLKHYWKR 295

Query: 270 MYG 278
            YG
Sbjct: 296 GYG 298


>SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2021

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 99  HFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPF----DEDDKDKSVWFLDHDYLE 266
           HF+R+ + G   + V V+L  W    V  +SNS +  F    +E  ++  + + +  Y+E
Sbjct: 466 HFHRLIQAGMIPQEVHVVLHLWNTSWVSTLSNSSSADFVSLSNEIQREIYILYKNSSYIE 525

Query: 267 NM 272
            +
Sbjct: 526 EL 527


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,177,993
Number of Sequences: 59808
Number of extensions: 366588
Number of successful extensions: 682
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)