Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L24
         (824 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    62   5e-12
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    28   0.091
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    28   0.091
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.6  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 62.5 bits (145), Expect = 5e-12
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
 Frame = +3

Query: 225 ALVTGCTDGIGKEYAKELAARGCDIVLVSRSLDKLKATAEEIE-KEYKVATKIIQADFSE 401
           ALVTG   GIGK   + L  +G  ++ ++  +DK+K   EE++ K  K+    +Q D S 
Sbjct: 10  ALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVP--LQCDLSN 67

Query: 402 DD---KIYENIEKEIAGLEIGTLVNNVGVSYTYPEYFLDLPEWDKLIPTLIKANVVAVTK 572
            +   K+ E +EK +  ++I  L+NN  ++        ++ +W K    +   N++ +T 
Sbjct: 68  QNDILKVIEWVEKNLGAIDI--LINNATINIDVTLQNDEVLDWKK----IFDINLLGLTC 121

Query: 573 MTRIVLPEMVKR--EKGVVINIGSASSIIPSPL---LTVYAATKAYVDKFSEGLDMEYS- 734
           M + VL  M K+    G+++NI  AS +   P+      Y A+K  +   ++ L  E + 
Sbjct: 122 MIQEVLKLMKKKGINNGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQ 181

Query: 735 -XKGIVVQCILPGFVCSNMSGIVVXRYSR 818
               I V  I P  V ++M+   +   SR
Sbjct: 182 CESNIKVISISPDLVETDMTAQWLKENSR 210


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 28.3 bits (60), Expect = 0.091
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 273 ELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSEDDKIYENIEKE-IAGLE 449
           +++  GC    V + ++ LK T   +E  YK+  +++ A  ++D ++ + I  E I   +
Sbjct: 62  DMSQLGCLKACVMKRIEMLKGTELYVEPVYKM-IEVVHAGNADDIQLVKGIANECIENAK 120

Query: 450 IGTLVNNVGVSYT 488
             T   N+G  YT
Sbjct: 121 GETDECNIGNKYT 133


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 28.3 bits (60), Expect = 0.091
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 273 ELAARGCDIVLVSRSLDKLKATAEEIEKEYKVATKIIQADFSEDDKIYENIEKE-IAGLE 449
           +++  GC    V + ++ LK T   +E  YK+  +++ A  ++D ++ + I  E I   +
Sbjct: 62  DMSQLGCLKACVMKRIEMLKGTELYVEPVYKM-IEVVHAGNADDIQLVKGIANECIENAK 120

Query: 450 IGTLVNNVGVSYT 488
             T   N+G  YT
Sbjct: 121 GETDECNIGNKYT 133


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -2

Query: 319 RDRLTRTMSHPRAANSLAYSFPIPSVHPVTSAHFPLDLKSTQCTAGP 179
           RDRLT  M H   A  +A   P  S    T +  P    ST   + P
Sbjct: 334 RDRLTAMMHHLHVAKQMASPEPPKSSESSTGSSIPKLNLSTALMSQP 380



 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 420 NIEKEIAGLEIGTLVNNVGVSYTYPEYFLDLPEWDKLIP 536
           N+ K +AGL + +  +++  +    E  LD+   DK+ P
Sbjct: 238 NVPKSVAGLNVSSRRSDMNGTTPLDEKPLDVSSNDKVHP 276


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 309 SRSLDKLKATAEEIEKEYKVATKIIQADFSEDD 407
           S S  + KA A E+E E ++   ++QA     D
Sbjct: 159 SHSRSQEKAVAAELEDEQRLLATVVQAHLDTCD 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,215
Number of Sequences: 438
Number of extensions: 5047
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)