Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L22
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q94GM8 Cluster: Putative uncharacterized protein OSJNBb...    37   0.45 
UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1; ...    37   0.45 
UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza sativa...    35   1.8  
UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2; ...    35   2.4  
UniRef50_A3UNY4 Cluster: Zinc protease; n=6; Vibrionales|Rep: Zi...    33   5.5  
UniRef50_Q4SU90 Cluster: Chromosome 3 SCAF13974, whole genome sh...    33   9.6  
UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8; ...    33   9.6  

>UniRef50_Q94GM8 Cluster: Putative uncharacterized protein
           OSJNBb0052C09.3; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0052C09.3 - Oryza sativa subsp. japonica (Rice)
          Length = 643

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +3

Query: 69  VGVXNASPKVNXVHXKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQL 245
           V V    P     H +Q+N   + Q HV +E +   T H   HK+K+T+   D  + +++
Sbjct: 490 VKVYGDGPLQEICHVEQENIVMNSQSHVQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEI 549

Query: 246 TSVNEQERNELKEMIGNYVD 305
               +Q+ N++  +  N ++
Sbjct: 550 ICAKKQQCNKMDFITDNSME 569


>UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 943

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 108 HXKQQNCENSPQGHVFNEAQVIGTWHPQQHKS-KKTYAFGDSECVQLTSVNEQERNELKE 284
           + KQQ C  S Q  V NE+QV  + +  + KS    Y        + +  +EQ+ +++K 
Sbjct: 116 YKKQQKCGQSNQQSVLNESQVGKSKNISKQKSFLNDYKSSQQTLTKSSKKDEQQHSKVKF 175

Query: 285 MIGNYVDKMKWEN 323
            I N +D +K +N
Sbjct: 176 SIDNQIDSIKIKN 188


>UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza
           sativa|Rep: Os02g0129000 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 750

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +3

Query: 69  VGVXNASPKVNXVHXKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQL 245
           V V    P     H +Q+N   + Q H  +E +   T H   HK+K+T+   D  + +++
Sbjct: 575 VKVYGDGPLQEICHVEQENIVMNSQSHAQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEI 634

Query: 246 TSVNEQERNELKEMIGNYVD 305
               EQ+ +++  +  N ++
Sbjct: 635 ICAKEQQCSKMDFITDNSME 654


>UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 740

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +2

Query: 230 RMCSINFGQRTGKKRIKRNDRELRRQNEMGELNSENANT 346
           R+ SI+FG   GKK +KR   + + + EM E+N +N NT
Sbjct: 594 RILSIDFG---GKKSLKRKMEDEQMEKEMAEMNDQNDNT 629


>UniRef50_A3UNY4 Cluster: Zinc protease; n=6; Vibrionales|Rep: Zinc
           protease - Vibrio splendidus 12B01
          Length = 926

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 20/79 (25%), Positives = 35/79 (44%)
 Frame = +3

Query: 84  ASPKVNXVHXKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQ 263
           ASP     +   QN   +   HV  +++ + T   ++ KS     FG     QL  V + 
Sbjct: 641 ASPTGQFAYAMNQNTYQADSDHVLLDSKSVETVSVEEIKSVHQQLFGQFRNNQLVIVGDI 700

Query: 264 ERNELKEMIGNYVDKMKWE 320
           + +ELK ++  Y+  +  E
Sbjct: 701 DPSELKPLVRQYLASIPLE 719


>UniRef50_Q4SU90 Cluster: Chromosome 3 SCAF13974, whole genome
           shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 3
           SCAF13974, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 280

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -1

Query: 199 LCCCGCHVPITWASLKTWPCGEFSQFCCLXCTXLTFGDAXMTPTANNTMRRHRRCGDMLT 20
           L CCG H   +W +   +P   F   CC+  +  ++ D   +  A   + + + C  ++T
Sbjct: 181 LRCCGVHNYTSWFNSVYFPVSGFPASCCVSFSDCSYADLKNSTLAARKVHK-QGCYQLVT 239

Query: 19  S--ERN 8
           S  ERN
Sbjct: 240 SFIERN 245


>UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8;
           Cyanobacteria|Rep: Putative uncharacterized protein -
           Crocosphaera watsonii
          Length = 320

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 288 IGNYV--DKMKWENLTLRMQIPCPSDKHNVTKDYYLERLEGDGFYRT 422
           + NYV  DK+ WEN      +    +K+  T  YY E +  D  YRT
Sbjct: 138 VDNYVFLDKISWENFNESCHLKEQVEKYKKTFGYYPESVHVDKIYRT 184


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,106,789
Number of Sequences: 1657284
Number of extensions: 14136821
Number of successful extensions: 35242
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35224
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)