Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_L21
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0211 - 6436275-6436361,6436969-6437235,6438475-6438543,643... 157 7e-39
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 37 0.021
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 34 0.11
07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536... 30 2.4
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460... 30 2.4
09_02_0481 - 9772783-9773985 29 3.2
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 29 3.2
02_01_0353 + 2545982-2549833 29 3.2
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 29 5.6
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 28 7.4
08_02_0888 - 22284554-22285144 28 9.7
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 28 9.7
02_03_0267 - 17081551-17082636,17084935-17085252 28 9.7
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 28 9.7
>03_02_0211 -
6436275-6436361,6436969-6437235,6438475-6438543,
6439108-6439236,6439319-6439480,6439558-6439678,
6439813-6439928,6440697-6440762,6441010-6441091,
6441236-6441327,6441430-6441537,6441919-6442013,
6442092-6442234,6442336-6442364,6442452-6442571,
6442645-6442734,6443116-6443181,6443267-6443380,
6443482-6443574
Length = 682
Score = 157 bits (382), Expect = 7e-39
Identities = 81/190 (42%), Positives = 111/190 (58%)
Frame = +2
Query: 221 MVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELT 400
+VK + +I +I +L D S N + G L+GL+ V VGL + +L ++
Sbjct: 35 IVKQLATSGEHDKISAVIALLTNDFTMSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIV 94
Query: 401 NPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPEQQVKHAAE 580
P++ F + +SRVRY A EAL+N+ K+VRG + F IFDAL KL+AD + V+ AA
Sbjct: 95 PPVLTSFLDQDSRVRYYACEALYNIAKVVRGDFIIYFNKIFDALCKLSADSDANVQSAAH 154
Query: 581 LLDRLLKDIVTXXXXXXXXXXXXXXRERMYTRSAPARQLAVSWVAVLDAVPDLNVLAHLP 760
LLDRL+KDIVT RERM + RQ V W+ VLD+VPD+++L LP
Sbjct: 155 LLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLP 214
Query: 761 DLLDGLFXML 790
D LDGLF ML
Sbjct: 215 DFLDGLFNML 224
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +2
Query: 293 LMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFN 472
L S++ + GA M LS + GL V Y P L P++ C S+ + VR +
Sbjct: 1690 LSDSSSVCARQGAGMLLSLLVQGLAVELVPYAPFLVVPLLRCMSDPDGSVRQTVTHSFAA 1749
Query: 473 VLKIVRGASLSQFPVIFDALAKLAADPEQQVKHAAELLD 589
++ ++ A S P D L++ + + + +LLD
Sbjct: 1750 LVPLLPLAKGSLLP---DGLSERLSSSAEDAQFLEQLLD 1785
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 290 DLMSSTNPNM-KNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEAL 466
D + S + N+ ++GA GLS V LGK DY ++ I+ S ++ VR L
Sbjct: 1624 DTLKSDSSNVERSGAAQGLSEVLAALGK---DYFDQILPDIIRNCSHQKASVR-DGHLTL 1679
Query: 467 FNVL-KIVRGASLSQFPVIFDALAKLAADPEQQVKHAA 577
F L + + G + ++ A+ AD + V+ AA
Sbjct: 1680 FRYLPRSLGGVFQNYLQIVLPAILDGLADENESVRDAA 1717
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 SQIKK--LIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSE 427
S +KK + +L Q L + + GAL+G + LGK Y+ ++ ++ FS+
Sbjct: 1332 SSLKKYGIAAILQQGLEDRASAKSREGALLGFECLCEKLGKLFEPYVIQMLPLLLVSFSD 1391
Query: 428 SESRVRYQA 454
VR A
Sbjct: 1392 QVLAVRESA 1400
>07_03_1778 +
29451902-29452166,29452665-29452849,29453504-29453693,
29453990-29454168,29454263-29454314,29454426-29454553,
29454920-29455099,29455209-29455276,29455364-29455506,
29455682-29455743,29455874-29455987,29456180-29456320,
29456680-29456832,29456973-29457026,29457102-29457212,
29457339-29457512,29457600-29457680,29457788-29457886,
29457905-29458057
Length = 843
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 337 HKCSVFHIRIS*RHQVLAQDFDQFFYL-ASIFCIIKIF 227
H+ +V HIRI RH +L + D F YL A +F ++ F
Sbjct: 779 HQTNVPHIRIEFRHTLLCLESDLFPYLSARLFLLVIAF 816
>02_03_0220 + 16545571-16545573,16545717-16545818,16545980-16546008,
16549421-16553036
Length = 1249
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 323 NGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLKIVR 490
N L G TVA LG+ Y+P++ I + S ++ R +AA+ + + +++
Sbjct: 932 NVILNGFETVANALGQRVKPYVPQICGIIKWMLNTSSAKARQRAADLMSRIAIVMK 987
>09_02_0481 - 9772783-9773985
Length = 400
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 512 PVIFDALAKLAADPEQQVKHAAELLDR 592
PV++ AL LAA PE Q+K A+ L+R
Sbjct: 196 PVLYIALGTLAAIPEVQLKEVADGLER 222
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 323 NGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLKIVR 490
N L G V LG+ YLP++ I + ++VR QAA+ + + +++
Sbjct: 762 NVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMK 817
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 323 NGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLKIVR 490
N L G V LG+ YLP++ I + ++VR QAA+ + + +++
Sbjct: 887 NVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMK 942
>01_01_0020 +
147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 368 KASVD-YLPELTNPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLA 544
KA V+ LP+ T ++ C +E R Y+A A V +I G S + + D L K+
Sbjct: 787 KADVNAQLPKKTEHVLFCSLTTEQRATYRAFLASSEVEQIFDGNRNSLYGI--DVLRKIC 844
Query: 545 ADPE-QQVKHAAE 580
P+ + +HAA+
Sbjct: 845 NHPDLLEREHAAQ 857
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = -1
Query: 640 RRQLHGPALGHDVLEQSIQQFSSMLHLLLRISSEFSQRIENYREL**RSASDNLQHVEQC 461
R LH A + + +Q+ + + LLL S +R++ +++ ++ S NLQ ++Q
Sbjct: 634 RYNLHLHAFQENANKSWLQRNAESMGLLLETSDSEEERVQGHKQR--KATSANLQKLQQD 691
Query: 460 LSCLV 446
LS L+
Sbjct: 692 LSELL 696
>08_02_0888 - 22284554-22285144
Length = 196
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 615 RAGPWSCRRWWGWCESACT 671
R GPW RRW W A T
Sbjct: 129 REGPWQLRRWHNWYIRAST 147
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 615 RAGPWSCRRWWGWCESACT 671
R GPW RRW W A T
Sbjct: 370 REGPWQLRRWHNWYIRAST 388
>02_03_0267 - 17081551-17082636,17084935-17085252
Length = 467
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/95 (24%), Positives = 36/95 (37%)
Frame = +2
Query: 266 KLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVR 445
K I L L S T N A S A+ KA + + P+V +
Sbjct: 264 KAITFLISALQSGTMEARSNAAAAIFSLSALDSNKAKIGESGAM-RPLVDLLEHGSMTAK 322
Query: 446 YQAAEALFNVLKIVRGASLSQFPVIFDALAKLAAD 550
AA A+F++ K+ S + + D + K +D
Sbjct: 323 KDAASAIFSLCKLHENKSRATKSGVIDVVLKAISD 357
>01_05_0309 -
20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 218 PMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLS 346
P ++D N +TSQ ++ K+L ++ ST +M+ ++ LS
Sbjct: 808 PRMEDINTTTSTSQSSEINKLLATNVSISTISDMERTQIVALS 850
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,521,586
Number of Sequences: 37544
Number of extensions: 346993
Number of successful extensions: 901
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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