Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_L21
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC125109-1|AAI25110.1| 782|Homo sapiens Vac14 homolog (S. cerev... 192 9e-49
BC125108-1|AAI25109.1| 782|Homo sapiens Vac14 homolog (S. cerev... 192 9e-49
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 33 1.2
BC018314-1|AAH18314.1| 771|Homo sapiens Unknown (protein for IM... 33 1.2
AF019039-1|AAB83973.1| 896|Homo sapiens transportin2 protein. 33 1.2
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 33 1.2
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 33 1.2
U88836-1|AAD00655.1| 994|Homo sapiens translational activator G... 32 2.1
U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein. 32 2.1
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 32 2.1
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 32 2.1
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 32 2.1
D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein. 32 2.1
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 32 2.1
AF054284-1|AAC97189.1| 1304|Homo sapiens spliceosomal protein SA... 32 2.1
AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein. 32 2.1
BC065283-1|AAH65283.1| 508|Homo sapiens KIAA1305 protein protein. 32 2.7
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein. 32 2.7
AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein. 29 4.5
AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransfera... 30 8.3
>BC125109-1|AAI25110.1| 782|Homo sapiens Vac14 homolog (S.
cerevisiae) protein.
Length = 782
Score = 192 bits (469), Expect = 9e-49
Identities = 90/190 (47%), Positives = 131/190 (68%)
Frame = +2
Query: 221 MVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELT 400
+V++F NT QIK +I+ L Q+ S +P+ + G L+GL+ ++ LGK S YL EL
Sbjct: 36 LVREFVAQNNTVQIKHVIQTLSQEFALSQHPHSRKGGLIGLAACSIALGKDSGLYLKELI 95
Query: 401 NPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPEQQVKHAAE 580
P++ CF++++SR+RY A EAL+N++K+ RGA L F V+FD L+KLAADP+ VK +E
Sbjct: 96 EPVLTCFNDADSRLRYYACEALYNIVKVARGAVLPHFNVLFDGLSKLAADPDPNVKSGSE 155
Query: 581 LLDRLLKDIVTXXXXXXXXXXXXXXRERMYTRSAPARQLAVSWVAVLDAVPDLNVLAHLP 760
LLDRLLKDIVT RER+Y+ + ARQ +SW+ VL++VPD+N+L +LP
Sbjct: 156 LLDRLLKDIVTESNKFDLVSFIPLLRERIYSNNQYARQFIISWILVLESVPDINLLDYLP 215
Query: 761 DLLDGLFXML 790
++LDGLF +L
Sbjct: 216 EILDGLFQIL 225
>BC125108-1|AAI25109.1| 782|Homo sapiens Vac14 homolog (S.
cerevisiae) protein.
Length = 782
Score = 192 bits (469), Expect = 9e-49
Identities = 90/190 (47%), Positives = 131/190 (68%)
Frame = +2
Query: 221 MVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELT 400
+V++F NT QIK +I+ L Q+ S +P+ + G L+GL+ ++ LGK S YL EL
Sbjct: 36 LVREFVAQNNTVQIKHVIQTLSQEFALSQHPHSRKGGLIGLAACSIALGKDSGLYLKELI 95
Query: 401 NPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPEQQVKHAAE 580
P++ CF++++SR+RY A EAL+N++K+ RGA L F V+FD L+KLAADP+ VK +E
Sbjct: 96 EPVLTCFNDADSRLRYYACEALYNIVKVARGAVLPHFNVLFDGLSKLAADPDPNVKSGSE 155
Query: 581 LLDRLLKDIVTXXXXXXXXXXXXXXRERMYTRSAPARQLAVSWVAVLDAVPDLNVLAHLP 760
LLDRLLKDIVT RER+Y+ + ARQ +SW+ VL++VPD+N+L +LP
Sbjct: 156 LLDRLLKDIVTESNKFDLVSFIPLLRERIYSNNQYARQFIISWILVLESVPDINLLDYLP 215
Query: 761 DLLDGLFXML 790
++LDGLF +L
Sbjct: 216 EILDGLFQIL 225
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLK-IVRG 493
+K ++ L +A G + V YLPEL ++ C S+ ++ VR A L +V
Sbjct: 410 VKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQ 469
Query: 494 ASLSQFPVIFDALAKLAADPEQQVKHAA 577
+ L K D ++V+ AA
Sbjct: 470 PPDMHLKPLMTELLKRILDGNKRVQEAA 497
>BC018314-1|AAH18314.1| 771|Homo sapiens Unknown (protein for
IMAGE:4154236) protein.
Length = 771
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLK-IVRG 493
+K ++ L +A G + V YLPEL ++ C S+ ++ VR A L +V
Sbjct: 410 VKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQ 469
Query: 494 ASLSQFPVIFDALAKLAADPEQQVKHAA 577
+ L K D ++V+ AA
Sbjct: 470 PPDMHLKPLMTELLKRILDGNKRVQEAA 497
>AF019039-1|AAB83973.1| 896|Homo sapiens transportin2 protein.
Length = 896
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLK-IVRG 493
+K ++ L +A G + V YLPEL ++ C S+ ++ VR A L +V
Sbjct: 409 VKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQ 468
Query: 494 ASLSQFPVIFDALAKLAADPEQQVKHAA 577
+ L K D ++V+ AA
Sbjct: 469 PPDMHLKPLMTELLKRILDGNKRVQEAA 496
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLK-IVRG 493
+K ++ L +A G + V YLPEL ++ C S+ ++ VR A L +V
Sbjct: 410 VKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQ 469
Query: 494 ASLSQFPVIFDALAKLAADPEQQVKHAA 577
+ L K D ++V+ AA
Sbjct: 470 PPDMHLKPLMTELLKRILDGNKKVQEAA 497
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLK-IVRG 493
+K ++ L +A G + V YLPEL ++ C S+ ++ VR A L +V
Sbjct: 574 VKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQ 633
Query: 494 ASLSQFPVIFDALAKLAADPEQQVKHAA 577
+ L K D ++V+ AA
Sbjct: 634 PPDMHLKPLMTELLKRILDGNKRVQEAA 661
>U88836-1|AAD00655.1| 994|Homo sapiens translational activator GCN1
protein.
Length = 994
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 269 LIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRY 448
LI++LG D S N+K L LS + +G A +LP+L +S VR
Sbjct: 633 LIRILG-DRFSW---NVKAALLETLSLLLAKVGIALKPFLPQLQTTFTKALQDSNRGVRL 688
Query: 449 QAAEALFNVLKI 484
+AA+AL ++ I
Sbjct: 689 KAADALGKLISI 700
>U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein.
Length = 1928
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 269 LIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRY 448
LI++LG D S N+K L LS + +G A +LP+L +S VR
Sbjct: 1469 LIRILG-DRFSW---NVKAALLETLSLLLAKVGIALKPFLPQLQTTFTKALQDSNRGVRL 1524
Query: 449 QAAEALFNVLKI 484
+AA+AL ++ I
Sbjct: 1525 KAADALGKLISI 1536
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVR 445
+K ++ L +A G + + YLPEL ++ C S+ ++ VR
Sbjct: 413 VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVR 455
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVR 445
+K ++ L +A G + + YLPEL ++ C S+ ++ VR
Sbjct: 413 VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVR 455
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVR 445
+K ++ L +A G + + YLPEL ++ C S+ ++ VR
Sbjct: 413 VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVR 455
>D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein.
Length = 2675
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 269 LIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRY 448
LI++LG D S N+K L LS + +G A +LP+L +S VR
Sbjct: 2314 LIRILG-DRFSW---NVKAALLETLSLLLAKVGIALKPFLPQLQTTFTKALQDSNRGVRL 2369
Query: 449 QAAEALFNVLKI 484
+AA+AL ++ I
Sbjct: 2370 KAADALGKLISI 2381
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 317 MKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVR 445
+K ++ L +A G + + YLPEL ++ C S+ ++ VR
Sbjct: 413 VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVR 455
>AF054284-1|AAC97189.1| 1304|Homo sapiens spliceosomal protein SAP 155
protein.
Length = 1304
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 332 LMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLKIVR 490
L G TV LGK YLP++ ++ + ++VR QAA+ + +++
Sbjct: 911 LNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK 963
>AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein.
Length = 2392
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 269 LIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRY 448
LI++LG D S N+K L LS + +G A +LP+L +S VR
Sbjct: 2031 LIRILG-DRFSW---NVKAALLETLSLLLAKVGIALKPFLPQLQTTFTKALQDSNRGVRL 2086
Query: 449 QAAEALFNVLKI 484
+AA+AL ++ I
Sbjct: 2087 KAADALGKLISI 2098
>BC065283-1|AAH65283.1| 508|Homo sapiens KIAA1305 protein protein.
Length = 508
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +3
Query: 702 CPGWRCWTPCPT-STCWP--ISRTYW 770
CP W+ WTP P WP I+ T+W
Sbjct: 344 CPPWKAWTPGPAFGPLWPGAIAATFW 369
>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
Length = 1819
Score = 31.9 bits (69), Expect = 2.7
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +3
Query: 702 CPGWRCWTPCPT-STCWP--ISRTYW 770
CP W+ WTP P WP I+ T+W
Sbjct: 265 CPPWKAWTPGPAFGPLWPGAIAATFW 290
>AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.
Length = 1092
Score = 29.1 bits (62), Expect(2) = 4.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 591 DCSRTS*PRAGPWSCRRWWGWCESAC 668
DC+ + P G WSC W C ++C
Sbjct: 900 DCNPQACPVRGAWSCWTSWSPCSASC 925
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +3
Query: 702 CPGWRCWT 725
CPGW W+
Sbjct: 963 CPGWSPWS 970
>AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransferase
type I beta subunit protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 26 HCASLSRIMLCNWKTTNIKQCVIVVKSVQNVKITTVRYFQETNNY 160
+CAS ML NW ++K+ + ++ +KI F++ NY
Sbjct: 176 YCASCICYMLNNWSGMDMKKAITYIRRSMLLKIFQYTNFEKNRNY 220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,778,669
Number of Sequences: 237096
Number of extensions: 1965639
Number of successful extensions: 7967
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7966
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -