Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L21
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical pr...   132   4e-31
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr...    35   0.058
AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical ...    33   0.18 
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr...    32   0.54 
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p...    32   0.54 
U00048-10|AAB53823.2|  852|Caenorhabditis elegans Related to yea...    31   1.2  
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p...    29   5.0  
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p...    29   5.0  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical
           protein K04G2.6 protein.
          Length = 694

 Score =  132 bits (318), Expect = 4e-31
 Identities = 64/191 (33%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
 Frame = +2

Query: 221 MVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLG-KASVDYLPEL 397
           +V+D  +    SQ+ K + VLG+ L++S N N + G L+G++  ++ LG K +  Y  +L
Sbjct: 35  LVRDLFNNNQLSQLDKCLSVLGE-LINSGNSNQRKGGLIGMAAASIALGNKNAPPYTAKL 93

Query: 398 TNPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPEQQVKHAA 577
             PI+ CF +++ ++RY A E+L+N+ KI + + L+ F  IFD L ++ AD +Q V+  A
Sbjct: 94  VEPIIPCFHDADLQIRYYACESLYNIAKICKTSVLAHFEDIFDVLWRVTADSDQNVRGGA 153

Query: 578 ELLDRLLKDIVTXXXXXXXXXXXXXXRERMYTRSAPARQLAVSWVAVLDAVPDLNVLAHL 757
           ELL+RL+ +IV               R+R+YT+++  R+  + W+  +D+ P  +   ++
Sbjct: 154 ELLNRLITEIVLSEQEFDIAILMSLIRDRIYTQTSSNRRFILEWLNTIDSAPFFSFCNYI 213

Query: 758 PDLLDGLFXML 790
            ++ DGLF ML
Sbjct: 214 SEISDGLFKML 224


>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical protein
            ZK430.1 protein.
          Length = 1650

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = +2

Query: 362  LGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKL 541
            +G A  D  PEL N I+    +S +++RY+A   L  ++K +         ++   L +L
Sbjct: 1557 IGNADPDSFPELLNKIMLKTRDSRAKIRYRALIVLELLIKEIGDGVQPHLSILLPFLNEL 1616

Query: 542  AADPEQQVK 568
              D  +QV+
Sbjct: 1617 IEDENKQVE 1625


>AC024770-5|AAK84605.2|  684|Caenorhabditis elegans Hypothetical
           protein Y39H10A.6 protein.
          Length = 684

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
 Frame = +2

Query: 251 TSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELT----NPIVAC 418
           TS ++ L++  G  + +++   ++   L G    A+ + + S D++ E T    + IV C
Sbjct: 71  TSSVETLVEETGFTIETTSGARVRANILKGNYDAAIQILETSNDHITEETAKHGSYIVKC 130

Query: 419 FSESESRVRYQAAEALFNVLKIVRGASL 502
           F  ++   + +  +ALF + K++RG  L
Sbjct: 131 FKLADLVRKGRYFDALFTMQKMIRGVIL 158


>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical protein
            T08A11.2 protein.
          Length = 1322

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +2

Query: 332  LMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLKIV 487
            L G  T+   LG+ +  Y+P++   I+   +   ++VR QAA+ +  +  ++
Sbjct: 929  LDGFGTICSSLGRRAKAYIPQICGTILWRLNNKSAKVRQQAADLIARIAPVM 980


>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
            protein T08A11.2 protein.
          Length = 1322

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +2

Query: 332  LMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAAEALFNVLKIV 487
            L G  T+   LG+ +  Y+P++   I+   +   ++VR QAA+ +  +  ++
Sbjct: 929  LDGFGTICSSLGRRAKAYIPQICGTILWRLNNKSAKVRQQAADLIARIAPVM 980


>U00048-10|AAB53823.2|  852|Caenorhabditis elegans Related to yeast
           vacuolar proteinsorting factor protein 16 protein.
          Length = 852

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 332 LMGLSTVAVGLGKASVDYLPELTNPIVACFSESESRVRYQAA 457
           L+ L+ V+  L KAS    P+L + +V     SESR  Y+ A
Sbjct: 570 LLQLNDVSAALQKASASQRPQLIHQVVRHLMNSESRSSYELA 611


>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
            protein F52C9.1a protein.
          Length = 1336

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -1

Query: 259  LASIFCIIKIFHHRLGGWNLKLRLSGQLGFLFSVVI 152
            + S+   +K+F  R+GGW  +L++S   G   ++ +
Sbjct: 1215 ICSLHSTVKLFDSRVGGWTCELKVSPGPGLTRAITV 1250


>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
            protein F52C9.1b protein.
          Length = 1331

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -1

Query: 259  LASIFCIIKIFHHRLGGWNLKLRLSGQLGFLFSVVI 152
            + S+   +K+F  R+GGW  +L++S   G   ++ +
Sbjct: 1215 ICSLHSTVKLFDSRVGGWTCELKVSPGPGLTRAITV 1250


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
 Frame = -1

Query: 751 GQHVEVGHGVQHRHPG-HGELXXXXXXRVHALSHQPHQRRQLHG 623
           G H    HGV H H G H  L        H   H  H     HG
Sbjct: 644 GDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHG 687


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,769,959
Number of Sequences: 27780
Number of extensions: 307947
Number of successful extensions: 773
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)