Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L21
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    26   0.35 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.2  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   7.5  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   7.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.9  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -1

Query: 640 RRQLHGPALGHDVLEQSIQQFSSMLHLLLRISSEFSQRIENYREL 506
           +R  + P+ G D+ +   +  + +  L +++  EFS+R+  + EL
Sbjct: 358 KRITNQPSEGEDISDYKFRHITEITILTVQLIVEFSKRLPGFDEL 402


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 49  YAL*LENYKYKAMCNSRKK-CPKC*NYNSKIFSRNQ*LRKIENLTDPTNEVLSSNHQADG 225
           +AL L N + K +C+  K  CP   NY+  +F +N  L  +  +    +EV    H  DG
Sbjct: 340 FALALHNLQ-KDVCSKLKGLCPSMANYDRGVFYKNY-LLNVSFIDAAGSEVKFDEH-GDG 396


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 49  YAL*LENYKYKAMCNSRKK-CPKC*NYNSKIFSRNQ*LRKIENLTDPTNEVLSSNHQADG 225
           +AL L N + K +C+  K  CP   NY+  +F +N  L  +  +    +EV    H  DG
Sbjct: 430 FALALHNLQ-KDVCSKLKGLCPSMANYDRGVFYKNY-LLNVSFIDAAGSEVKFDEH-GDG 486


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 649 PHQRRQLHGPALGHDVLEQSIQQFS 575
           PHQ +Q +G A+      QS+QQ S
Sbjct: 21  PHQHQQHYGAAVQVPQQTQSVQQQS 45


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 95  VVKSVQNVKITTVRYFQETNNYGK 166
           ++ S+ N  I+ +  +   NNY K
Sbjct: 81  IISSLSNNYISNISNYNNNNNYNK 104


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 95  VVKSVQNVKITTVRYFQETNNYGK 166
           ++ S+ N  I+ +  +   NNY K
Sbjct: 319 IISSLSNNYISNISNYNNNNNYNK 342


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 616 LGHDVLEQSIQQFSSMLHL 560
           LG   LEQ+IQQ    L L
Sbjct: 137 LGRKKLEQAIQQLQEQLQL 155


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = -1

Query: 670 VHALSHQPHQRRQLHGPALGHDVLEQSIQQFSSMLHLLLRISSEFSQRIEN 518
           ++ ++  P      + P L H +     +QFS+  +    +  E SQ I N
Sbjct: 256 IYGIALSPVTNNLYYSPLLSHGLYYVDTEQFSNPQYEENNVQYEGSQDILN 306


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,823
Number of Sequences: 438
Number of extensions: 3827
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)