Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_L19
(605 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF073299-1|AAD41635.1| 812|Homo sapiens Na+/H+ exchanger isofor... 32 1.4
AC007239-1|AAF19248.1| 812|Homo sapiens unknown protein. 32 1.4
S83549-1|AAB50820.1| 198|Homo sapiens Na+/H+ exchanger isoform ... 31 2.4
AM079204-1|CAL03350.1| 102|Homo sapiens immunoglobulin heavy ch... 31 2.4
AM082537-1|CAL06683.1| 101|Homo sapiens immunoglobulin heavy ch... 30 7.3
AM079574-1|CAL03720.1| 101|Homo sapiens immunoglobulin heavy ch... 30 7.3
AM079415-1|CAL03561.1| 100|Homo sapiens immunoglobulin heavy ch... 30 7.3
M28136-1|AAA52837.1| 153|Homo sapiens IGH@ protein. 29 9.6
AM081018-1|CAL05164.1| 101|Homo sapiens immunoglobulin heavy ch... 29 9.6
AM080121-1|CAL04267.1| 101|Homo sapiens immunoglobulin heavy ch... 29 9.6
>AF073299-1|AAD41635.1| 812|Homo sapiens Na+/H+ exchanger isoform 2
protein.
Length = 812
Score = 32.3 bits (70), Expect = 1.4
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = -2
Query: 538 VTNSNTFLVNQRLTFLKSNNMAQPNMIIIMIKIHLLSLKRSEEILLKRSKEILLRRSKDL 359
VT+S T + + L S N+ Q + H L+ SE +++KEIL+RR L
Sbjct: 593 VTSSETDEIRELL----SRNLYQIRQRTLSYNRHSLTADTSE----RQAKEILIRRRHSL 644
Query: 358 PESSMRYVDSVINNKRRWSVRMFQFAMQHAAARVPN--ESRLTLSFAFHFGTDPAVD 194
ES + DS +N + R S ++ ++P + R T+S A +D D
Sbjct: 645 RESIRK--DSSLNREHRASTSTSRYLSLPKNTKLPEKLQKRRTISIADGNSSDSDAD 699
>AC007239-1|AAF19248.1| 812|Homo sapiens unknown protein.
Length = 812
Score = 32.3 bits (70), Expect = 1.4
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = -2
Query: 538 VTNSNTFLVNQRLTFLKSNNMAQPNMIIIMIKIHLLSLKRSEEILLKRSKEILLRRSKDL 359
VT+S T + + L S N+ Q + H L+ SE +++KEIL+RR L
Sbjct: 593 VTSSETDEIRELL----SRNLYQIRQRTLSYNRHSLTADTSE----RQAKEILIRRRHSL 644
Query: 358 PESSMRYVDSVINNKRRWSVRMFQFAMQHAAARVPN--ESRLTLSFAFHFGTDPAVD 194
ES + DS +N + R S ++ ++P + R T+S A +D D
Sbjct: 645 RESIRK--DSSLNREHRASTSTSRYLSLPKNTKLPEKLQKRRTISIADGNSSDSDAD 699
>S83549-1|AAB50820.1| 198|Homo sapiens Na+/H+ exchanger isoform
NHE-2 protein.
Length = 198
Score = 31.5 bits (68), Expect = 2.4
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = -2
Query: 538 VTNSNTFLVNQRLTFLKSNNMAQPNMIIIMIKIHLLSLKRSEEILLKRSKEILLRRSKDL 359
VT+S T + + L S N+ Q + H L+ SE +++KEIL+RR L
Sbjct: 84 VTSSETDEIRELL----SRNLYQIRQRTLSYNRHSLTADTSE----RQAKEILIRRRHSL 135
Query: 358 PESSMRYVDSVINNKRRWSVRMFQFAMQHAAARVPN--ESRLTLSFA 224
ES + DS +N + R S ++ ++P + R T+S A
Sbjct: 136 RESIRK--DSSLNREHRASTSTSRYLSLPKNTKLPEKLQKRRTISIA 180
>AM079204-1|CAL03350.1| 102|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 102
Score = 31.5 bits (68), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 125 CIVNGYTFHNRVGDTWVREADVRIHGWVCT 214
C +G+TF N G +W+R+A + WV T
Sbjct: 25 CAASGFTFSNYYGMSWIRQAPGKGLEWVST 54
>AM082537-1|CAL06683.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 125 CIVNGYTFHNRVGDTWVREADVRIHGWV 208
C+V+G+TF N G +WVR+A + WV
Sbjct: 25 CVVSGFTFSN-YGMSWVRQAPGKGLEWV 51
>AM079574-1|CAL03720.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 119 IICIVNGYTFHNRVGDTWVREADVRIHGWV 208
+ C +G+TF+N G TWVR+A + WV
Sbjct: 23 LFCAASGFTFNN-YGMTWVRQAPGKGLEWV 51
>AM079415-1|CAL03561.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 125 CIVNGYTFHNRVGDTWVREADVRIHGWVCT 214
C +G+TF N G TWVR+A + WV T
Sbjct: 25 CAASGFTFSN-YGMTWVRQAPGKGLEWVST 53
>M28136-1|AAA52837.1| 153|Homo sapiens IGH@ protein.
Length = 153
Score = 29.5 bits (63), Expect = 9.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 119 IICIVNGYTFHNRVGDTWVREA 184
+ C +GYTFH+ G TWVR+A
Sbjct: 39 VSCKASGYTFHS-YGITWVRQA 59
>AM081018-1|CAL05164.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 125 CIVNGYTFHNRVGDTWVREADVRIHGWVCT 214
C V+G+TF + G TWVR+A + WV T
Sbjct: 25 CAVSGFTF-STYGMTWVRQAPGKGLEWVST 53
>AM080121-1|CAL04267.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.5 bits (63), Expect = 9.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 125 CIVNGYTFHNRVGDTWVREADVRIHGWV 208
C +G+TF N+ G TWVR+A + WV
Sbjct: 25 CAASGFTF-NKYGMTWVRQAPGKGLEWV 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,568,183
Number of Sequences: 237096
Number of extensions: 1365847
Number of successful extensions: 3311
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3311
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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