Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L15
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220...    31   1.5  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    30   2.6  
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006...    29   3.4  
03_02_0420 - 8298303-8299265,8299351-8299431,8299546-8299668,829...    29   4.5  
06_03_0592 + 22585546-22588573,22588680-22589032                       29   5.9  

>12_02_0875 -
           23920023-23920967,23921045-23921599,23921678-23922083,
           23922175-23922452
          Length = 727

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 616 DLLYREIPRRVFHTDTRKHGGITDQVHAQRLSLPHRSAQDRLIA 747
           D   RE  RR  +   R HGG+      +RLS  H+S QD   A
Sbjct: 437 DAKLREDSRRRVNVGGRNHGGVGGGEATKRLSRGHKSMQDTTAA 480


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 257 IEEAKPNGALDEVF-KKYCDKSAQLKGCISSVLQGVRPCVGNDYANHINDAQNSTNQLID 433
           I+ A P+G   + F KK    + Q    +S ++Q +      DY    N+A+ +TN L+D
Sbjct: 421 IDNASPSGFNTQAFLKKRSRATNQPVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLD 480


>03_06_0476 +
           34199577-34199638,34200267-34200397,34200535-34200698,
           34201007-34201117,34201308-34201387,34201489-34201639,
           34201736-34201829,34202421-34202509,34203672-34203745,
           34203859-34204021,34204445-34204530,34205011-34205094,
           34205186-34205366,34205837-34205887
          Length = 506

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
 Frame = +2

Query: 116 FSQITAVVTSQCTKNNA---ED---KVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 277
           FSQ T V+ +Q  + +    +D   K   V  A R++G  L GLV ++V +  + E+KP+
Sbjct: 109 FSQFTVVIATQLPERSLLKLDDICRKANIVLVAARSYG--LTGLVRISVKEHNVIESKPD 166

Query: 278 GALDEV 295
             LD++
Sbjct: 167 HFLDDL 172


>03_02_0420 -
           8298303-8299265,8299351-8299431,8299546-8299668,
           8299815-8299983,8300108-8300478
          Length = 568

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/79 (25%), Positives = 30/79 (37%)
 Frame = -3

Query: 808 KLSKVINFVMAXVLTERSPTVQSVCLGQSGVARRVFAHELDQ*FRHVCGCRCGTLFEGFH 629
           KL  +I    A V   R P +    + +  VA+ +    LD+    VC C    L +   
Sbjct: 16  KLKSLIKLAAARVAVARRPRLGRRSIARGDVAQLLSIGHLDRALLRVCPCHAFALPDTRR 75

Query: 628 DTGGHLINFCAFFNKAQVI 572
           D+  +      F    QVI
Sbjct: 76  DSSANSSRRVLFLQAEQVI 94


>06_03_0592 + 22585546-22588573,22588680-22589032
          Length = 1126

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/81 (22%), Positives = 35/81 (43%)
 Frame = +2

Query: 53  VTMMWKXVLITIFAAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLV 232
           VT+ +  +    F  G+    F ++ ++     ++NN   K+P+       F N L  L 
Sbjct: 656 VTLEYLEIQSNFFVGGI-PQSFMKLVSIKEMDISRNNLSGKIPQ-------FLNLLSSLH 707

Query: 233 DLNVLKTEIEEAKPNGALDEV 295
           DLN+     +   P G + ++
Sbjct: 708 DLNLSFNNFDGVIPTGGVFDI 728


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,825,161
Number of Sequences: 37544
Number of extensions: 451390
Number of successful extensions: 1251
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)