Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L09
         (604 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11734| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  

>SB_11734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 445

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 560 FFFCEQCSTKCYFSFL 513
           F F   C+TKC+FSFL
Sbjct: 144 FVFLLSCATKCFFSFL 159


>SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 161

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -2

Query: 342 FYTFETNKLH*VTCIFAQLNLK*CCICISSITVADVLIFFTHFLSNCNIGLQKXFQLLVN 163
           ++    NK H V  +  QLN     I + ++T+  +L F T  + +C   +      L++
Sbjct: 74  YFVARENKYHSVQPLSCQLNQCKLLIAVRTVTLYGLLPFCTSTIVDCRENINSLLATLLD 133

Query: 162 I 160
           I
Sbjct: 134 I 134


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,820,060
Number of Sequences: 59808
Number of extensions: 232086
Number of successful extensions: 463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)