Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L09
         (604 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071746-1|AAL49368.1|   96|Drosophila melanogaster RH52516p pro...    33   0.30 
AY071011-1|AAL48633.1|   96|Drosophila melanogaster RE09176p pro...    33   0.30 
AL021106-9|CAA15943.1|   96|Drosophila melanogaster EG:63B12.12 ...    33   0.30 
AE014298-278|AAF45682.1|   96|Drosophila melanogaster CG14818-PA...    33   0.30 
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB...    28   8.5  

>AY071746-1|AAL49368.1|   96|Drosophila melanogaster RH52516p
           protein.
          Length = 96

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 145 ERKNDDIHQQLKXLLQSNIAIRQEMREENKDVSNS 249
           E++ DDI  QL+ LL SN  IR+ + EEN +   S
Sbjct: 46  EQRTDDIMSQLRELLNSNREIRRLIAEENDNAPES 80


>AY071011-1|AAL48633.1|   96|Drosophila melanogaster RE09176p
           protein.
          Length = 96

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 145 ERKNDDIHQQLKXLLQSNIAIRQEMREENKDVSNS 249
           E++ DDI  QL+ LL SN  IR+ + EEN +   S
Sbjct: 46  EQRTDDIMSQLRELLNSNREIRRLIAEENDNAPES 80


>AL021106-9|CAA15943.1|   96|Drosophila melanogaster EG:63B12.12
           protein.
          Length = 96

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 145 ERKNDDIHQQLKXLLQSNIAIRQEMREENKDVSNS 249
           E++ DDI  QL+ LL SN  IR+ + EEN +   S
Sbjct: 46  EQRTDDIMSQLRELLNSNREIRRLIAEENDNAPES 80


>AE014298-278|AAF45682.1|   96|Drosophila melanogaster CG14818-PA
           protein.
          Length = 96

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 145 ERKNDDIHQQLKXLLQSNIAIRQEMREENKDVSNS 249
           E++ DDI  QL+ LL SN  IR+ + EEN +   S
Sbjct: 46  EQRTDDIMSQLRELLNSNREIRRLIAEENDNAPES 80


>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
           isoform B protein.
          Length = 2048

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +1

Query: 148 RKNDDIHQQLKXLLQSNIAIRQEMREENK 234
           RK ++ HQ+ + ++  N A+RQ++ E N+
Sbjct: 218 RKLEEEHQRCEQIVAQNSALRQQLEESNR 246


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,984,295
Number of Sequences: 53049
Number of extensions: 346907
Number of successful extensions: 788
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)