Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_L08
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 134 8e-32
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 61 9e-10
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 61 9e-10
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 60 2e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 59 3e-09
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 53 2e-07
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 46 4e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 46 4e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 46 4e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 46 4e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 46 4e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 45 5e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 45 5e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 45 5e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 45 7e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 45 7e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 44 9e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 44 9e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 43 2e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 43 3e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 43 3e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 43 3e-04
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 42 4e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 41 8e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 41 8e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 39 0.004
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.004
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.004
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.004
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.004
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 38 0.006
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 37 0.013
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 37 0.013
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 37 0.013
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 37 0.018
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.018
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 37 0.018
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.023
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.041
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 35 0.054
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 35 0.054
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 35 0.071
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 35 0.071
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 35 0.071
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 34 0.12
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 33 0.16
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.16
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.16
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 33 0.16
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 33 0.16
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 33 0.16
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.29
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.29
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.50
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.87
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 31 1.2
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 30 1.5
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 30 1.5
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 29 3.5
AF077546-1|AAC26314.1| 354|Caenorhabditis elegans Hypothetical ... 29 3.5
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 29 4.7
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 6.2
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 28 6.2
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical pr... 28 8.1
U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine rece... 28 8.1
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 134 bits (323), Expect = 8e-32
Identities = 72/173 (41%), Positives = 109/173 (63%), Gaps = 14/173 (8%)
Frame = +2
Query: 89 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 250
S T LI+NY+P+ MTQ+ + SLF+++G++ESCKL+ ++ GYGFV Y R +DA++A
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 251 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 430
+FNGL +QNKT+KVS+A +P NLY+ +P +TL +L +F FG+
Sbjct: 100 VSSFNGLRLQNKTIKVSYA------RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQ 153
Query: 431 IINSRI--------AAGIAFVLYEHQYEAERAIQNINGSTPPEFLHPLTVKYA 565
II SRI + G+ FV ++ + EA+ AI+ +NGS P +TVK+A
Sbjct: 154 IITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQITVKFA 206
Score = 34.7 bits (76), Expect = 0.071
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA------NRGYGFVEYTRPD 235
S + + L V+ IP+ MT + S+F G++ + ++++ ++G GFV + + D
Sbjct: 121 SNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKD 180
Query: 236 DAVKARKAFNG 268
+A A K NG
Sbjct: 181 EADVAIKTLNG 191
Score = 34.3 bits (75), Expect = 0.094
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = +2
Query: 332 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYE 490
P A + L++ NL ++ L LF+QFG I+N +I G AFV + E
Sbjct: 367 PPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTE 426
Query: 491 AERAIQNINGS 523
A A+ ++NG+
Sbjct: 427 AYNAMLSLNGT 437
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +2
Query: 140 MMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 298
+++ LFS G + + K++ + +GY FV + +A A + NG + KTL+V
Sbjct: 389 LLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 67.3 bits (157), Expect = 1e-11
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Frame = +2
Query: 59 QGNHXSGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI---ANRGYGFVEYTR 229
+G H P L V + +T+D + +LF+ +G + K+I +N Y FVE++
Sbjct: 34 EGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSD 93
Query: 230 PDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHG 409
A +A + N L+ ++ +KV+ A+ + + +++++ +L +E+ Q L
Sbjct: 94 HGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLRE 153
Query: 410 LFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQNING 520
F FG + ++++ + G FV Y + EAERAI+ +NG
Sbjct: 154 AFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Frame = +2
Query: 197 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 355
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 175 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 234
Query: 356 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAERAIQ 508
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +AI
Sbjct: 235 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIV 293
Query: 509 NIN 517
+N
Sbjct: 294 QMN 296
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 128 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 250
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 251 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 291
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 60.9 bits (141), Expect = 9e-10
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 265
+ + + +V+ ++ FS G + SCK+ + +GYGFV + + A A + N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 266 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 433
G+L+ K + V A N EL K N+Y+ N + + L LFA+FG I
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKLFAKFGNI 176
Query: 434 INSRI------AAGIAFVLYEHQYEAERAIQNINGST 526
+ + + G FV + + EAE A+Q ++ ST
Sbjct: 177 TSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDST 213
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 60.9 bits (141), Expect = 9e-10
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 265
+ + + +V+ ++ FS G + SCK+ + +GYGFV + + A A + N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 266 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 433
G+L+ K + V A N EL K N+Y+ N + + L LFA+FG I
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKLFAKFGNI 239
Query: 434 INSRI------AAGIAFVLYEHQYEAERAIQNINGST 526
+ + + G FV + + EAE A+Q ++ ST
Sbjct: 240 TSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDST 276
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 59.7 bits (138), Expect = 2e-09
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 265
+ + + +V+ ++ FS G + SCK+ + +GYGFV + + A A + N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 266 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 433
G+L+ K + V A N EL K N+Y+ N + + L +FA+FG I
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKVFAKFGNI 239
Query: 434 INSRI------AAGIAFVLYEHQYEAERAIQNINGST 526
+ + + G FV + + EAE A+Q ++ ST
Sbjct: 240 TSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDST 276
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 59.3 bits (137), Expect = 3e-09
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI---ANRGYGFVEYTRPDDAV 244
SG E T + N P + T + + +LF+ +G + K+I N Y FVE++ + A
Sbjct: 34 SGSEDPRTLFVANLDPAI-TDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQAT 92
Query: 245 KARKAFNGLLMQNKTLKVSHALLNPEL-KPPTKPEAD--WNLYICNLPNELTLQDLHGLF 415
A ++ NG + K + V+ A E + +KPE +++++ +L +E+ L F
Sbjct: 93 LALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAF 152
Query: 416 AQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQNINGS 523
+FG + ++I G FV Y + +AERAI +NG+
Sbjct: 153 VKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGA 196
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +2
Query: 62 GNHXSGPEASPT-KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVE 220
G + S PE S + V + + + F G++ K+I + +GYGFV
Sbjct: 120 GENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVS 179
Query: 221 YTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPE 322
Y R +DA +A NG + +T++ + A P+
Sbjct: 180 YPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 53.2 bits (122), Expect = 2e-07
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Frame = +2
Query: 98 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKA 259
KL V IP + + + LF GK+ ++ ++ G F+ Y D AV+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 260 FNG---LLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 430
+ L N+ ++V A + P D L+I L + + ++ LFA FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 431 IINSRI-------AAGIAFVLYEHQYEAERAIQNINGS-TPPEFLHPLTVKYA 565
+ + + G AFV Y+H +A AI ++GS T P L VKYA
Sbjct: 150 LDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYA 202
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIA--------FVLYEHQYEAERAIQN 511
NL+I +LP E +L +FA FG I+++++ A FV Y++ + ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 512 ING 520
+NG
Sbjct: 490 MNG 492
Score = 31.9 bits (69), Expect = 0.50
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 238
GP+ L + ++P+ + +F+ G + S K+ +R +GFV Y
Sbjct: 425 GPDGC--NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHS 482
Query: 239 AVKARKAFNGLLMQNKTLKVSHALLNPELKP 331
+ A A NG + K LKV E +P
Sbjct: 483 SQAAITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Frame = +2
Query: 332 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQY 487
P K L++ +P L +DL LF QFG+I I G AF+ Y H+
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 488 EAERAIQNING-STPPEFLHPLTVKYA 565
A R ++ T P + VK A
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPA 108
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 53.2 bits (122), Expect = 2e-07
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Frame = +2
Query: 98 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKA 259
KL V IP + + + LF GK+ ++ ++ G F+ Y D AV+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 260 FNG---LLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 430
+ L N+ ++V A + P D L+I L + + ++ LFA FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 431 IINSRI-------AAGIAFVLYEHQYEAERAIQNINGS-TPPEFLHPLTVKYA 565
+ + + G AFV Y+H +A AI ++GS T P L VKYA
Sbjct: 150 LDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYA 202
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIA--------FVLYEHQYEAERAIQN 511
NL+I +LP E +L +FA FG I+++++ A FV Y++ + ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 512 ING 520
+NG
Sbjct: 490 MNG 492
Score = 31.9 bits (69), Expect = 0.50
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 238
GP+ L + ++P+ + +F+ G + S K+ +R +GFV Y
Sbjct: 425 GPDGC--NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHS 482
Query: 239 AVKARKAFNGLLMQNKTLKVSHALLNPELKP 331
+ A A NG + K LKV E +P
Sbjct: 483 SQAAITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Frame = +2
Query: 332 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQY 487
P K L++ +P L +DL LF QFG+I I G AF+ Y H+
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 488 EAERAIQNING-STPPEFLHPLTVKYA 565
A R ++ T P + VK A
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPA 108
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 52.0 bits (119), Expect = 4e-07
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Frame = +2
Query: 59 QGNHXSGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVE 220
Q +H S P +S I +P D++ + S G + S K I ++ GYGFV+
Sbjct: 70 QQHHDSTPLSSTNLYIRGLMPNT-NDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVD 128
Query: 221 YTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQD 400
+ P A A N + ++ A L + + PT NLYI NLP + T Q
Sbjct: 129 FESPQAAAAAVDGLN-----TEGVQAQMAKLQQQEQDPT------NLYIANLPLDFTEQM 177
Query: 401 LHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNING 520
L +FG +I++RI + G+ F + + + E I +NG
Sbjct: 178 LETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 224
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 265
+ + + V+ ++ FS G + SCK+ + +GYGFV + A A + N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 266 GLLMQNKTLKVSHALLNPE-LKPPTKPEADW-NLYICNLPNELTLQDLHGLFAQFGRIIN 439
G+L+ +K + V + +K + + N+++ N L + L +F++FG I +
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 440 SRIAA-------GIAFVLYEHQYEAERAIQNINGS 523
+ + G FV + Q A +A++ +N S
Sbjct: 267 AVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDS 301
Score = 42.3 bits (95), Expect = 4e-04
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Frame = +2
Query: 95 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKA 259
T + V E + Q+ + ++FS G++ S ++ + +G+GFV + D A +A +
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 260 FNGLLMQNKTLKVS------HALLNPELK---PPTKPEA-----DWNLYICNLPNELTLQ 397
N +++ K+S + + ELK K E NLY+ N+ +L
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 398 DLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNIN 517
L F+ FG I ++++ + G FV +E EA A+ ++N
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 265
+ + + V+ ++ FS G + SCK+ + +GYGFV + A A + N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 266 GLLMQNKTLKVSHALLNPE-LKPPTKPEADW-NLYICNLPNELTLQDLHGLFAQFGRIIN 439
G+L+ +K + V + +K + + N+++ N L + L +F++FG I +
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 440 SRIAA-------GIAFVLYEHQYEAERAIQNINGS 523
+ + G FV + Q A +A++ +N S
Sbjct: 267 AVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDS 301
Score = 42.3 bits (95), Expect = 4e-04
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Frame = +2
Query: 95 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKA 259
T + V E + Q+ + ++FS G++ S ++ + +G+GFV + D A +A +
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 260 FNGLLMQNKTLKVS------HALLNPELK---PPTKPEA-----DWNLYICNLPNELTLQ 397
N +++ K+S + + ELK K E NLY+ N+ +L
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 398 DLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNIN 517
L F+ FG I ++++ + G FV +E EA A+ ++N
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
+GP ++ V +IP + +D + LF GK+ +L+ A+RGY FV Y +
Sbjct: 193 TGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKE 252
Query: 236 DAVKARKAFNG-LLMQNKTLKVSHALLNPEL 325
DA A K ++G + K LKV+ ++ N L
Sbjct: 253 DAAAAAKTYDGHEISTGKPLKVNVSIANTRL 283
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQ 280
L + I E +T++ + LF L+ K + + Y F+ + DD +KA + +NG ++
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKV--KDYAFIHFNERDDCLKAMEEWNGKELE 436
Query: 281 NKTLKVSHALLNPELKPPTKP 343
++ S L P + KP
Sbjct: 437 GTVVEAS--LAKPPQEKKKKP 455
Score = 31.9 bits (69), Expect = 0.50
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +2
Query: 191 IANRGYGFVEYTRPDDA--VKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLY 364
I NRG+ FV++ A +K + A + + N + V A E T + LY
Sbjct: 322 IKNRGFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDWAEHQEEPDEDTMSKVKV-LY 380
Query: 365 ICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNING 520
I N+ +T + L+ LF ++ + + AF+ + + + +A++ NG
Sbjct: 381 IRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNG 432
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 48.4 bits (110), Expect = 5e-06
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Frame = +2
Query: 89 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 250
S T L + + D++ + S G + S K I ++ GYGFV++ P A A
Sbjct: 105 SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 164
Query: 251 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 430
N + ++ A L + + PT NLYI NLP + T Q L +FG
Sbjct: 165 VDGLN-----TEGVQAQMAKLQQQEQDPT------NLYIANLPLDFTEQMLETELNKFGM 213
Query: 431 IINSRI-------AAGIAFVLYEHQYEAERAIQNING 520
+I++RI + G+ F + + + E I +NG
Sbjct: 214 VISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 250
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Frame = +2
Query: 197 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 355
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 62 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 121
Query: 356 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAERAIQ 508
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +AI
Sbjct: 122 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIV 180
Query: 509 NIN 517
+N
Sbjct: 181 QMN 183
Score = 34.3 bits (75), Expect = 0.094
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +2
Query: 290 LKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI------- 448
+KV+ A+ + + +++++ +L +E+ Q L F FG + ++++
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 449 -AAGIAFVLYEHQYEAERAIQNING 520
+ G FV Y + EAERAI+ +NG
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNG 85
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 128 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 250
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 138 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 178
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Frame = +2
Query: 197 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 355
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 72 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 131
Query: 356 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAERAIQ 508
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +AI
Sbjct: 132 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIV 190
Query: 509 NIN 517
+N
Sbjct: 191 QMN 193
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Frame = +2
Query: 263 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINS 442
N L+ ++ +KV+ A+ + + +++++ +L +E+ Q L F FG + ++
Sbjct: 2 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 61
Query: 443 RI--------AAGIAFVLYEHQYEAERAIQNING 520
++ + G FV Y + EAERAI+ +NG
Sbjct: 62 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 95
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 128 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 250
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 148 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 188
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Frame = +2
Query: 197 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 355
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 143 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 202
Query: 356 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAERAIQ 508
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +AI
Sbjct: 203 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIV 261
Query: 509 NIN 517
+N
Sbjct: 262 QMN 264
Score = 34.3 bits (75), Expect = 0.094
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +2
Query: 290 LKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI------- 448
+KV+ A+ + + +++++ +L +E+ Q L F FG + ++++
Sbjct: 82 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 141
Query: 449 -AAGIAFVLYEHQYEAERAIQNING 520
+ G FV Y + EAERAI+ +NG
Sbjct: 142 KSKGYGFVSYPKREEAERAIEQMNG 166
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 128 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 250
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 219 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 259
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Frame = +2
Query: 341 PEADWNLYICNLPNELTLQDLHGLFAQFG-----RIINSRIAAGIAFVLYEHQYEAERAI 505
PE + LYI NLP ++T ++++ +F +FG R+ N+ G AFV+YE ++A+ A
Sbjct: 15 PEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTAC 74
Query: 506 QNING 520
++++G
Sbjct: 75 EHLSG 79
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.8 bits (106), Expect = 2e-05
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARKAF 262
+ V + + ++ +++ S F+ G++ K+I + +GYGFV + +A A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 263 NGLLMQNKTLKVSHA-----------LLNPELKPPTKPEADWNLYICNLPNELTLQDLHG 409
NG + + ++ + A L ++ TK + + ++Y+ N+ + T DL
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKAD-NTSVYVGNISQQTTDADLRD 255
Query: 410 LFAQFGRIINSRI--AAGIAFVLYEHQYEAERAIQNING 520
LF+ +G I RI AFV YE + A +AI +NG
Sbjct: 256 LFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNG 294
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 83 EASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAF 262
+A T + V I + T + LFST G + ++ + Y FV Y + + A KA
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEM 292
Query: 263 NGLLMQNKTLKVS 301
NG M ++ S
Sbjct: 293 NGKEMAGNQVRCS 305
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 45.6 bits (103), Expect = 4e-05
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
S P+ K+ V IP + LF G + SC ++ A++G FV +
Sbjct: 48 SEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRK 107
Query: 236 DAVKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHG 409
DA++A+ A + + KV + +P ++KP T+ + L+I L + ++L
Sbjct: 108 DAIEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 410 LFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNINGSTPPEFLH-PLTVKYA 565
+FA+FG I + + + G AFV + ++ A A + ++ S E PL VK+A
Sbjct: 161 IFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFA 220
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 511
NL+I +LP + DL FA FG I+++++ + FV YE+ A AI
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 512 ING 520
+NG
Sbjct: 560 MNG 562
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 238
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552
Query: 239 AVKARKAFNGLLMQNKTLKV 298
A A A NG + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 45.6 bits (103), Expect = 4e-05
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
S P+ K+ V IP + LF G + SC ++ A++G FV +
Sbjct: 48 SEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRK 107
Query: 236 DAVKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHG 409
DA++A+ A + + KV + +P ++KP T+ + L+I L + ++L
Sbjct: 108 DAIEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 410 LFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNINGSTPPEFLH-PLTVKYA 565
+FA+FG I + + + G AFV + ++ A A + ++ S E PL VK+A
Sbjct: 161 IFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFA 220
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 511
NL+I +LP + DL FA FG I+++++ + FV YE+ A AI
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 512 ING 520
+NG
Sbjct: 560 MNG 562
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 238
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552
Query: 239 AVKARKAFNGLLMQNKTLKV 298
A A A NG + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 45.6 bits (103), Expect = 4e-05
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
S P+ K+ V IP + LF G + SC ++ A++G FV +
Sbjct: 48 SEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRK 107
Query: 236 DAVKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHG 409
DA++A+ A + + KV + +P ++KP T+ + L+I L + ++L
Sbjct: 108 DAIEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 410 LFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNINGSTPPEFLH-PLTVKYA 565
+FA+FG I + + + G AFV + ++ A A + ++ S E PL VK+A
Sbjct: 161 IFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFA 220
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 511
NL+I +LP + DL FA FG I+++++ + FV YE+ A AI
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 512 ING 520
+NG
Sbjct: 489 MNG 491
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 238
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 424 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 481
Query: 239 AVKARKAFNGLLMQNKTLKV 298
A A A NG + +K LKV
Sbjct: 482 ATNAISAMNGFQIGSKRLKV 501
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 45.6 bits (103), Expect = 4e-05
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
S P+ K+ V IP + LF G + SC ++ A++G FV +
Sbjct: 48 SEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRK 107
Query: 236 DAVKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHG 409
DA++A+ A + + KV + +P ++KP T+ + L+I L + ++L
Sbjct: 108 DAIEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 410 LFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNINGSTPPEFLH-PLTVKYA 565
+FA+FG I + + + G AFV + ++ A A + ++ S E PL VK+A
Sbjct: 161 IFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFA 220
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 45.6 bits (103), Expect = 4e-05
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
S P+ K+ V IP + LF G + SC ++ A++G FV +
Sbjct: 48 SEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRK 107
Query: 236 DAVKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHG 409
DA++A+ A + + KV + +P ++KP T+ + L+I L + ++L
Sbjct: 108 DAIEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 410 LFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNINGSTPPEFLH-PLTVKYA 565
+FA+FG I + + + G AFV + ++ A A + ++ S E PL VK+A
Sbjct: 161 IFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFA 220
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 511
NL+I +LP + DL FA FG I+++++ + FV YE+ A AI
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 512 ING 520
+NG
Sbjct: 560 MNG 562
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 238
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552
Query: 239 AVKARKAFNGLLMQNKTLKV 298
A A A NG + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Frame = +2
Query: 95 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 256
+++ V I + +DM+ F G ++S + ++ + FVEY P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 257 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 397
+ NG ++ + LKV+ + P+ P +P D + +Y+ ++ +L+
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 398 DLHGLFAQFGRIINSRIA 451
DL +F FG I+ ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Frame = +2
Query: 95 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 256
+++ V I + +DM+ F G ++S + ++ + FVEY P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 257 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 397
+ NG ++ + LKV+ + P+ P +P D + +Y+ ++ +L+
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 398 DLHGLFAQFGRIINSRIA 451
DL +F FG I+ ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Frame = +2
Query: 95 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 256
+++ V I + +DM+ F G ++S + ++ + FVEY P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 257 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 397
+ NG ++ + LKV+ + P+ P +P D + +Y+ ++ +L+
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 398 DLHGLFAQFGRIINSRIA 451
DL +F FG I+ ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +2
Query: 92 PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKA 259
P +L V+ IP + + ++F +G + ++I N +G+GFV PDDA +AR
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 260 FNGLLMQNKTLKVSHA 307
FNG ++ + ++V+ A
Sbjct: 159 FNGTTIEGRRVEVNLA 174
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +2
Query: 92 PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKA 259
P +L V+ IP + + ++F +G + ++I N +G+GFV PDDA +AR
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 260 FNGLLMQNKTLKVSHA 307
FNG ++ + ++V+ A
Sbjct: 159 FNGTTIEGRRVEVNLA 174
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDA 241
SGP+ P +L V+ IP + ++F G + ++I N +G+GFV RP DA
Sbjct: 147 SGPDG-PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDA 205
Query: 242 VKARKAFNGLLMQNKTLKVSHA 307
+AR+ +G +++ + ++V+ A
Sbjct: 206 ERARQELHGSMIEGRKIEVNCA 227
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +2
Query: 299 SHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG------RIINSRIAAGI 460
S A+ P+ + P+ L++ N+P DL +F +FG I N R + G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 461 AFVLYEHQYEAERAIQNINGS 523
FV E +AERA Q ++GS
Sbjct: 195 GFVTMERPQDAERARQELHGS 215
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDA 241
SGP+ P +L V+ IP + ++F G + ++I N +G+GFV RP DA
Sbjct: 147 SGPDG-PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDA 205
Query: 242 VKARKAFNGLLMQNKTLKVSHA 307
+AR+ +G +++ + ++V+ A
Sbjct: 206 ERARQELHGSMIEGRKIEVNCA 227
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +2
Query: 299 SHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG------RIINSRIAAGI 460
S A+ P+ + P+ L++ N+P DL +F +FG I N R + G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 461 AFVLYEHQYEAERAIQNINGS 523
FV E +AERA Q ++GS
Sbjct: 195 GFVTMERPQDAERARQELHGS 215
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 262
+ V + E +++ +++ L G + S + +R G+GFVE+ +DA A K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 263 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG----- 427
N + + K +KV+ A + + + N+++ NL E+ + L+ F+ FG
Sbjct: 75 NMIKLYGKPIKVNKASAHEK-----NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQV 129
Query: 428 ----RIINSRIAAGIAFVLYEHQYEAERAIQNINGSTPPEFL--HPLTVKYA 565
R ++S + G AF+ + ++ A++ +NG +FL +TV YA
Sbjct: 130 PKIMRDVDSGTSKGFAFINFASFEASDTALEAMNG----QFLCNRAITVSYA 177
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 43.2 bits (97), Expect = 2e-04
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Frame = +2
Query: 101 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 262
+ V + E +++ +++ L G + S + +R G+GFVE+ +DA A K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 263 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG----- 427
N + + K +KV+ A + + + N+++ NL E+ + L+ F+ FG
Sbjct: 85 NMIKLYGKPIKVNKASAHEK-----NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQV 139
Query: 428 ----RIINSRIAAGIAFVLYEHQYEAERAIQNINGSTPPEFL--HPLTVKYA 565
R ++S + G AF+ + ++ A++ +NG +FL +TV YA
Sbjct: 140 PKIMRDVDSGTSKGFAFINFASFEASDTALEAMNG----QFLCNRAITVSYA 187
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +2
Query: 350 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAERAIQNING 520
D +Y+ LP++ T Q+L +F +FGRI +R G AFV Y+ +AE A++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 521 S 523
S
Sbjct: 62 S 62
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +2
Query: 350 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAERAIQNING 520
D +Y+ LP++ T Q+L +F +FGRI +R G AFV Y+ +AE A++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 521 S 523
S
Sbjct: 62 S 62
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +2
Query: 350 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAERAIQNING 520
D +Y+ LP++ T Q+L +F +FGRI +R G AFV Y+ +AE A++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 521 S 523
S
Sbjct: 62 S 62
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +2
Query: 104 IVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQN 283
I N ++T+D + LF GK+ + A +G+GFV++ A ++ ++ NG+ +
Sbjct: 87 IGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGMSWKA 146
Query: 284 KTLKVSHALLNPELKPPTKPE 346
L V A+L L+ PT E
Sbjct: 147 CCLDVHLAMLG-SLRKPTGNE 166
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
S P+ K+ V IP + LF G + SC ++ A++G FV +
Sbjct: 48 SEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRK 107
Query: 236 DAVKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHG 409
DA++A+ A + + KV + +P ++KP T+ + L+I L + ++L
Sbjct: 108 DAIEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 410 LFAQFGRI 433
+FA+FG I
Sbjct: 161 IFAKFGHI 168
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 41.1 bits (92), Expect = 8e-04
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Frame = +2
Query: 74 SGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPD 235
S P+ K+ V IP + LF G + SC ++ A++G FV +
Sbjct: 48 SEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRK 107
Query: 236 DAVKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHG 409
DA++A+ A + + KV + +P ++KP T+ + L+I L + ++L
Sbjct: 108 DAIEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLRE 160
Query: 410 LFAQFGRI 433
+FA+FG I
Sbjct: 161 IFAKFGHI 168
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Frame = +2
Query: 203 GYGFVEYTRPDDAVKARKAFNGLLMQNKT--LKVSH-------ALLNPELKPPTKPEADW 355
G+GFV++ DA A K G L+ + LK+SH AL E+K + E
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECT- 748
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRIA---------AGIAFVLYEHQYEAERAIQ 508
L + NLP E +++++ LF FG + RI G FV + EA RA
Sbjct: 749 KLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAFD 808
Query: 509 NINGST 526
++ ST
Sbjct: 809 SLVHST 814
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Frame = +2
Query: 95 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-------NRGYGFVEYTRPDDAVKA 250
TKL+V +P + + +LF T G +++ ++ +RG+GFV++ D+A +A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +2
Query: 152 LFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 307
+F +G + ++I N +G+GFV PDDA +AR FNG ++ + ++V+ A
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 89 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKAR 253
S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 254 KAFNGLLMQNKTLKVSHALLNPE 322
NG+ + +K L V A N +
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQ 371
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 89 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKAR 253
S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 254 KAFNGLLMQNKTLKVSHALLNPE 322
NG+ + +K L V A N +
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQ 371
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 89 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKAR 253
S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 264 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 323
Query: 254 KAFNGLLMQNKTLKVSHALLNPE 322
NG+ + +K L V A N +
Sbjct: 324 AGLNGMQLGDKQLVVQLACANQQ 346
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 89 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKAR 253
S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 267 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 326
Query: 254 KAFNGLLMQNKTLKVSHALLNPE 322
NG+ + +K L V A N +
Sbjct: 327 AGLNGMQLGDKQLVVQLACANQQ 349
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = +2
Query: 332 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQY 487
P + W +++ N+ E T D+H F+++G+I N + G A V YE Q
Sbjct: 48 PQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQK 107
Query: 488 EAERAIQNIN 517
EA AI N
Sbjct: 108 EANEAIDQSN 117
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDD 238
G + S + V I +++D + S+FS G + S K++ +R GYGF+E+
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQT 71
Query: 239 AVKARKAFNGLLMQNKTLKVSHA 307
A A + NG + + L+V A
Sbjct: 72 AEVAIRNLNGYELSGRILRVDSA 94
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 359 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNING 520
+YI LPN + +D+ F +G++ + + G FV ++ Q +A+ A+ ++NG
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNG 57
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 365 ICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQYEAERAIQNIN 517
+ NLP E+ +L LF + GR+I IA G AFV +E + +A RAI +N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +2
Query: 107 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 268
V +P+ M +D + LF +G++ + ++ G+ FV + DDA +A N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 269 LLMQNKTLKV 298
+ M + LKV
Sbjct: 240 IRMYHMVLKV 249
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +2
Query: 353 WNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYEAERAIQ 508
+++Y+ N P + T DL F+Q G + N RI G AFV + + A+RA+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 509 NING 520
NG
Sbjct: 64 QFNG 67
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +2
Query: 107 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 268
V P T+D + + FS G + + +++ +R G+ FVE+T A +A FNG
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 269 LLMQNKTLKVSHA 307
+ + L+V+ A
Sbjct: 68 VDFNGRALRVNLA 80
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Frame = +2
Query: 353 WNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYEAERAIQ 508
+++Y+ N P + T ++L F+ G+I N RI G AF+ + + A+RA++
Sbjct: 5 FSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVE 64
Query: 509 NINGS 523
+NG+
Sbjct: 65 QMNGA 69
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +2
Query: 107 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 268
V P T++ + + FS++G++ + +++ +R G+ F+E+ A +A + NG
Sbjct: 9 VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68
Query: 269 LLMQNKTLKVSHA 307
+ L+V+ A
Sbjct: 69 AEFNGRPLRVNLA 81
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.013
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Frame = +2
Query: 98 KLIVNYI-PEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 256
K+ V I PEV +D+ S F+ G++ ++ +RG+ FVE+T + A
Sbjct: 30 KIFVGGISPEVNNEDLS-SHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-- 86
Query: 257 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 436
L + +T+K E+KP K + +++ LP++ + QDL F QFG++
Sbjct: 87 ----LAAREQTIKGKSV----EVKP-AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVD 137
Query: 437 N--------SRIAAGIAFVLYEHQYEAERA 502
+ ++ AF+++E + A++A
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 37.1 bits (82), Expect = 0.013
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Frame = +2
Query: 98 KLIVNYI-PEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 256
K+ V I PEV +D+ S F+ G++ ++ +RG+ FVE+T + A
Sbjct: 30 KIFVGGISPEVNNEDLS-SHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-- 86
Query: 257 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 436
L + +T+K E+KP K + +++ LP++ + QDL F QFG++
Sbjct: 87 ----LAAREQTIKGKSV----EVKP-AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVD 137
Query: 437 N--------SRIAAGIAFVLYEHQYEAERA 502
+ ++ AF+++E + A++A
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.018
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Frame = +2
Query: 83 EASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA----NRGYGFVEYTRPDDAVKA 250
EA+ T L V +P + + + +F GK+E + + Y FV + D A++A
Sbjct: 166 EATRT-LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 251 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 430
+ Q++ ++ + + K + L++ L + + L F +FG
Sbjct: 225 KAE-----EQDRPIRAGGSRMKIGYG---KSQVSRRLFVGGLGSWCDKEILQKAFGEFGF 276
Query: 431 IINSRIAAG--IAFVLYEHQYEAERAIQNINGSTPPEFLHPLTVKYA 565
+ N G A+V+YE+ + ++ A +++ G+ + HP+ V YA
Sbjct: 277 VENIDYDHGQPYAYVVYENTHTSQEACRSLRGACISKGNHPIMVDYA 323
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 36.7 bits (81), Expect = 0.018
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Frame = +2
Query: 83 EASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA----NRGYGFVEYTRPDDAVKA 250
EA+ T L V +P + + + +F GK+E + + Y FV + D A++A
Sbjct: 166 EATRT-LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 251 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 430
+ Q++ ++ + + K + L++ L + + L F +FG
Sbjct: 225 KAE-----EQDRPIRAGGSRMKIGYG---KSQVSRRLFVGGLGSWCDKEILQKAFGEFGF 276
Query: 431 IINSRIAAG--IAFVLYEHQYEAERAIQNINGSTPPEFLHPLTVKYA 565
+ N G A+V+YE+ + ++ A +++ G+ + HP+ V YA
Sbjct: 277 VENIDYDHGQPYAYVVYENTHTSQEACRSLRGACISKGNHPIMVDYA 323
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 36.7 bits (81), Expect = 0.018
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Frame = +2
Query: 83 EASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA----NRGYGFVEYTRPDDAVKA 250
EA+ T L V +P + + + +F GK+E + + Y FV + D A++A
Sbjct: 143 EATRT-LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
Query: 251 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 430
+ Q++ ++ + + K + L++ L + + L F +FG
Sbjct: 202 KAE-----EQDRPIRAGGSRMKIGYG---KSQVSRRLFVGGLGSWCDKEILQKAFGEFGF 253
Query: 431 IINSRIAAG--IAFVLYEHQYEAERAIQNINGSTPPEFLHPLTVKYA 565
+ N G A+V+YE+ + ++ A +++ G+ + HP+ V YA
Sbjct: 254 VENIDYDHGQPYAYVVYENTHTSQEACRSLRGACISKGNHPIMVDYA 300
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRI------AAGIAFVLYEHQYEAERAIQNIN 517
N+Y+ N + + L LFA+FG I + + + G FV + + EAE A+Q ++
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 213
Query: 518 GST 526
ST
Sbjct: 214 DST 216
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +2
Query: 353 WNLYICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQYEAERAIQ 508
+++Y+ N+P + T +++ FA G + N RI G AFV + + A+RA++
Sbjct: 6 FSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVE 65
Query: 509 NING 520
+NG
Sbjct: 66 QLNG 69
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +2
Query: 107 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 268
V +P T++ + + F+ +G + + +++ +R G+ FVE++ A +A + NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 269 LLMQNKTLKVSHA 307
+ + L+V++A
Sbjct: 70 VAFNGRNLRVNYA 82
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 332 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAER 499
P D +Y+ NLP ++ +++ +F ++GRI I S AFV +E +AE
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAED 61
Query: 500 AIQNING 520
A++ +G
Sbjct: 62 AVRARDG 68
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 332 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAER 499
P D +Y+ NLP ++ +++ +F ++GRI I S AFV +E +AE
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAED 61
Query: 500 AIQNING 520
A++ +G
Sbjct: 62 AVRARDG 68
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 359 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNINGST 526
LY+ +P +D+ +G+I N + G AFV +E +AE A +++G T
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKT 59
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 359 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNINGST 526
LY+ +P +D+ +G+I N + G AFV +E +AE A +++G T
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKT 59
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 359 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNINGST 526
LY+ +P +D+ +G+I N + G AFV +E +AE A +++G T
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKT 59
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 511
NL+I +LP + DL FA FG I+++++ + FV YE+ A AI
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 512 ING 520
+NG
Sbjct: 396 MNG 398
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 77 GPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 238
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 331 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 388
Query: 239 AVKARKAFNGLLMQNKTLKV 298
A A A NG + +K LKV
Sbjct: 389 ATNAISAMNGFQIGSKRLKV 408
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 107 VNYIPEVMTQDMMFSLFSTMGKLESCKLI--ANRG---YGFVEYTRPDDAVKARKAFN-- 265
+ IP+ +F +F GK+ C+++ +N G GFV DA + RK N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 266 GLLMQNKTLKVS-HALLNPELKP 331
L+ +N TLKV+ H + L P
Sbjct: 77 NLIGENFTLKVTDHKNVGGSLLP 99
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 329 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAERAI 505
P K L++ NLPNE+ +L LF+ G I ++ G AF+ + + AE A
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAK 167
Query: 506 QNING 520
+ I+G
Sbjct: 168 EAIDG 172
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 329 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAERAI 505
P K L++ NLPNE+ +L LF+ G I ++ G AF+ + + AE A
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAK 167
Query: 506 QNING 520
+ I+G
Sbjct: 168 EAIDG 172
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 107 VNYIPEVMTQDMMFSLFSTMGKLESCKLI--ANRG---YGFVEYTRPDDAVKARKAFN-- 265
+ IP+ +F +F GK+ C+++ +N G GFV DA + RK N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 266 GLLMQNKTLKVS-HALLNPELKP 331
L+ +N TLKV+ H + L P
Sbjct: 77 NLIGENFTLKVTDHKNVGGSLLP 99
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 92 PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVKARK 256
PT ++V + + + M+ +F + G++E L NRG+ + + DDA K+ +
Sbjct: 126 PTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCE 185
Query: 257 AFNGLLMQNKTLKVS 301
N + + +++S
Sbjct: 186 QLNNFELAGRCIRLS 200
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 92 PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVKARK 256
PT ++V + + + M+ +F + G++E L NRG+ + + DDA K+ +
Sbjct: 271 PTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCE 330
Query: 257 AFNGLLMQNKTLKVS 301
N + + +++S
Sbjct: 331 QLNNFELAGRCIRLS 345
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Frame = +2
Query: 323 LKPPTKPEA---DWNLYICNLPNELTLQDLHGLFAQFGRII------NSRIAAGIAFVLY 475
+KP T+ A D +Y+ N+P QDL +F +GR++ N R + G FV
Sbjct: 38 VKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTL 97
Query: 476 EHQYEAERA 502
+ E+A
Sbjct: 98 DSIESCEKA 106
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 98 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFN 265
++ V+ IP + + ++F G++ S +++ N +G+GFV + KAR A +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 266 GLLMQNKTLKVSHA 307
+Q + ++V A
Sbjct: 112 ESHVQGRIIEVRRA 125
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Frame = +2
Query: 323 LKPPTKPEA---DWNLYICNLPNELTLQDLHGLFAQFGRII------NSRIAAGIAFVLY 475
+KP T+ A D +Y+ N+P QDL +F +GR++ N R + G FV
Sbjct: 38 VKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTL 97
Query: 476 EHQYEAERA 502
+ E+A
Sbjct: 98 DSIESCEKA 106
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 98 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFN 265
++ V+ IP + + ++F G++ S +++ N +G+GFV + KAR A +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 266 GLLMQNKTLKVSHA 307
+Q + ++V A
Sbjct: 112 ESHVQGRIIEVRRA 125
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Frame = +2
Query: 335 TKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYE 490
T ++ W +YI L L+ D+ +F+Q+G ++N + + G AF+ Y+ Q
Sbjct: 33 TYKDSAW-IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS 91
Query: 491 AERAIQNING 520
A+ N NG
Sbjct: 92 TILAVDNFNG 101
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = +2
Query: 26 KMSESCQXGNCQGNHXSGPEASPTK-LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR 202
+M+E Q G+ E P L V + V T + + +FS GK+ +C+++ +R
Sbjct: 217 EMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR 276
Query: 203 ------GYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 298
Y F+E+ +A + +L+ ++ + V
Sbjct: 277 RSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 359 LYICNLPNELTLQDLHGLFAQFGRIINSRI 448
L++C L T +DL +F++FG+I N I
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = +2
Query: 26 KMSESCQXGNCQGNHXSGPEASPTK-LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR 202
+M+E Q G+ E P L V + V T + + +FS GK+ +C+++ +R
Sbjct: 217 EMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR 276
Query: 203 ------GYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 298
Y F+E+ +A + +L+ ++ + V
Sbjct: 277 RSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 359 LYICNLPNELTLQDLHGLFAQFGRIINSRI 448
L++C L T +DL +F++FG+I N I
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.9 bits (69), Expect = 0.50
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = +2
Query: 26 KMSESCQXGNCQGNHXSGPEASPTK-LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR 202
+M+E Q G+ E P L V + V T + + +FS GK+ +C+++ +R
Sbjct: 148 EMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR 207
Query: 203 ------GYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 298
Y F+E+ +A + +L+ ++ + V
Sbjct: 208 RSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 245
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 359 LYICNLPNELTLQDLHGLFAQFGRIINSRI 448
L++C L T +DL +F++FG+I N I
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 203
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = +2
Query: 86 ASPTK-LIVNYIPEVMTQDMMFSLFSTMGKLESCKLI-------ANRGYGFVEYTRPDDA 241
ASP K +++ + + + + +FS G +++ L +RGYG+VEY +DA
Sbjct: 129 ASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDA 188
Query: 242 VKARKAFNG 268
K+ K +G
Sbjct: 189 EKSIKHMDG 197
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +2
Query: 320 ELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIA------AGIAFVLYEH 481
E+KP P + +Y+ N E+ + L LF Q G ++ + A A V +E
Sbjct: 2 EIKPTPSPPEERTIYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAKFALVEFED 61
Query: 482 QYEAERAIQNING 520
+ AI+ +NG
Sbjct: 62 ELSVLFAIELMNG 74
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 341 PEADWNLYICNLPNELTLQDLHGLFAQFGRIIN-SRIAAGIAFVLYEHQYEAERAIQNIN 517
P+A + I NLP++ T Q + FG + + +A G A + + +AERA +
Sbjct: 381 PQATRVIIIRNLPSDYTWQIVRDRVRNFGEVDSVDMMAPGAARIRFATFQDAERARAALY 440
Query: 518 GST 526
GST
Sbjct: 441 GST 443
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 197 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 307
+RG+GFVE+ +DA A N + KT++V+ A
Sbjct: 51 HRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFA 87
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 197 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 298
++GYGFV + +D V+A + +G + N+ +K+
Sbjct: 243 SKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKL 276
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 212 FVEYTRPDDAVKARKAFNGLLMQNKTLKV 298
F E+T D KA AF GLL+ K +KV
Sbjct: 732 FNEFTADHDRKKAATAFEGLLLSLKNMKV 760
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 221 YTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKP 343
Y+ P DA+ K FN ++++ V ++P+LK KP
Sbjct: 156 YSGPMDAIPMEKFFNKVILEADKKAVPKGSIDPKLKVDPKP 196
>AF077546-1|AAC26314.1| 354|Caenorhabditis elegans Hypothetical
protein T08E11.6 protein.
Length = 354
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 626 VRPYQWINHISAVGEHNSPNTWSIYIYN 709
V P QWI+H + + NS + SI+ YN
Sbjct: 126 VTPRQWIDHCMELTDSNSIDQLSIFAYN 153
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 356 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 448
NL+I +LP + DL FA FG I+++++
Sbjct: 77 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 107
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 98 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKL 190
K++V+ I +TQ + S FS GK+ SC L
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCIL 143
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Frame = +2
Query: 350 DWNLYICNLPNELTLQDLHGLFAQFGRII---------NSRIAAGIAFVLYEHQYEAERA 502
+W L I NLP + +DL L + G+ + + + AG F+ + + +AE+
Sbjct: 94 EWRLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKG 153
Query: 503 IQNIN 517
+ N
Sbjct: 154 REFFN 158
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Frame = +2
Query: 269 LLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNL---PNELTLQDLHGLFAQFGRIIN 439
++ QN T S P+ + + + +Y+ + P ++L G F QFG ++
Sbjct: 1 MVAQNPTSISSGGRKQPQKQDKVQKKQLKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLR 60
Query: 440 SRIA--------AGIAFVLYEHQYEAERAIQNING 520
R+A G A+V ++++ AE A +++NG
Sbjct: 61 IRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNG 95
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Frame = +2
Query: 44 QXGNCQGNHXSGPEAS--PTK-LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----- 199
+ G N P AS P + L V I ++ + F GK++ ++ +
Sbjct: 84 EQGIATWNPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKP 143
Query: 200 RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSH 304
RGY F+EY+ + A K +G+ + K L V +
Sbjct: 144 RGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDY 178
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Frame = +2
Query: 50 GNCQGNHXSGPEASPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYG 211
G Q P+ S + N + T+ + +F G++ C L+ +R G+G
Sbjct: 62 GRNQQYDRENPQPSKCLGVFN-LSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFG 120
Query: 212 FVEYTRPDDAVKARKAFNGLLMQNKTLKVSHAL 310
F+ + +DA AR + ++V +L
Sbjct: 121 FIYFNLIEDATAARDKLCNTDLDGHKIRVDFSL 153
>Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical
protein C05G5.1 protein.
Length = 456
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -2
Query: 364 VEIPVGFRFCWWL-KFWIK 311
+ IPVGF CWW+ KF ++
Sbjct: 64 LSIPVGFLACWWIDKFGLR 82
>U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine
receptor, class x protein47 protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 625 YGIFCKSIIIIFMLMRITFISI 560
YGIFCK + II +++ I SI
Sbjct: 168 YGIFCKYLTIIILILLIDLFSI 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,449,642
Number of Sequences: 27780
Number of extensions: 288882
Number of successful extensions: 910
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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