Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_L04
         (394 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n...    33   1.5  
UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella ve...    33   1.5  
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr...    31   6.0  
UniRef50_Q02393 Cluster: M.musculus DNA for HC1 locus; n=1; Mus ...    31   7.9  
UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2; ...    31   7.9  
UniRef50_Q8N962 Cluster: CDNA FLJ38312 fis, clone FCBBF3021506; ...    31   7.9  

>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
           Rattus norvegicus
          Length = 294

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 24  INMFKYLVVRCYSCVCCRKAFGV*VPSCLHRPSCRCVYFTCCVLCIFRLLTSWL 185
           I +  ++  R   CVC   ++ + V  C+H   C CV    CV C++  +  W+
Sbjct: 114 IYLLCFVYARLCVCVCVCVSYHLEVTLCIHLGVCMCVCVCVCV-CVYVCVCMWV 166


>UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 242

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +3

Query: 129 CVYFTCCVLCIFRLLTSWLFCLHL-----LGPIHLLRSLIDNQKAILNA 260
           CVY  C   C+F     WL C+ L      G + L+ S+ + Q+  LNA
Sbjct: 147 CVYLPCIAFCLFLFRKIWLLCISLGLNGVGGSLILIPSVPEMQRCCLNA 195


>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
           alga; n=1; Ostreococcus tauri|Rep: T08009 probable
           ribosomal protein L5-green alga - Ostreococcus tauri
          Length = 331

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 211 MGPSRCRQNSQEVSRRNM-QSTQQVKYTQRQLGRCR 107
           MG  R ++ SQ V++    QS  QVK+ +R+LG C+
Sbjct: 1   MGKRRQKRKSQSVAKTTAYQSRYQVKFARRRLGACK 36


>UniRef50_Q02393 Cluster: M.musculus DNA for HC1 locus; n=1; Mus
           musculus|Rep: M.musculus DNA for HC1 locus - Mus
           musculus (Mouse)
          Length = 118

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 39  YLVVRCYSCVCCRKAFGV*VPSCLHRPSCRCVYFTCCVLCIFRLLTSWLFCLHL 200
           Y+ V  Y+CVC      + V  C++   C CV+   CV C +  +     C+ L
Sbjct: 69  YVHVSVYACVC------ICVCMCMYACVCMCVFVCMCVCCHWMPMNCEHVCMEL 116


>UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Dictyostelium discoideum AX4
          Length = 988

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = -1

Query: 190 QNSQEVSRRNMQSTQQVKYTQRQLGRCRQL 101
           Q +Q++ ++ MQ  QQ++Y Q+QL + +Q+
Sbjct: 36  QQAQQLQQQQMQHQQQIQYAQQQLQQAQQI 65


>UniRef50_Q8N962 Cluster: CDNA FLJ38312 fis, clone FCBBF3021506;
           n=2; Homo sapiens|Rep: CDNA FLJ38312 fis, clone
           FCBBF3021506 - Homo sapiens (Human)
          Length = 134

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +3

Query: 63  CVC-CRKAFGV*VPSCLHRPSCRCVYFTCCV-LCIFRLLTSWLFCLHL 200
           CVC CR    V +  C+  P C CVY    V +C+  +      C H+
Sbjct: 7   CVCMCRWCLCVCIYMCVCVPVCMCVYVCVYVRICVICVCVCVFVCAHM 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,534,164
Number of Sequences: 1657284
Number of extensions: 3072374
Number of successful extensions: 9514
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9502
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)