Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_L04
(394 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 1.7
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 2.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 2.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 2.9
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 3.8
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 3.8
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 5.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 5.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 20 8.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 20 8.8
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 132 VYFTCCVLCIFRLLTSWL 185
+Y CC+L I ++ WL
Sbjct: 248 IYIPCCMLVIVSWVSFWL 265
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 132 VYFTCCVLCIFRLLTSWL 185
+Y CC+L I ++ WL
Sbjct: 248 IYIPCCMLVIVSWVSFWL 265
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 2.2
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +3
Query: 150 VLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQKAILNAIE 266
++C+ L+ W CL L P +L+ N +N ++
Sbjct: 282 LICMMLLIGHWSGCLQFLVP--MLQGFPSNSWVAINELQ 318
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 2.2
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +3
Query: 150 VLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQKAILNAIE 266
++C+ L+ W CL L P +L+ N +N ++
Sbjct: 250 LICMMLLIGHWSGCLQFLVP--MLQGFPSNSWVAINELQ 286
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 2.9
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = +3
Query: 120 SCRCVYFTCCVLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQKAILNAIEFRLCDTVTN 293
SC+C+Y LC+ L +L L L+ S N + EF + N
Sbjct: 182 SCKCIYVQSINLCMAGRLFGYLCPGMALSQFDLMGSPYRNLTFVRREGEFSVLQVSFN 239
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 139 KYTQRQLGRCRQLGTHTPK 83
+Y Q RC+ +G H P+
Sbjct: 342 RYRQELQKRCKWMGIHEPE 360
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 139 KYTQRQLGRCRQLGTHTPK 83
+Y Q RC+ +G H P+
Sbjct: 342 RYRQELQKRCKWMGIHEPE 360
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 5.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 225 SLIDNQKAILNAIEFRLCDTVTNY 296
+L N IL + R TVTNY
Sbjct: 200 TLFGNVLVILAVVRERALQTVTNY 223
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 5.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 51 RCYSCVCCRKAF 86
+ Y C+ C+KAF
Sbjct: 60 KTYQCLLCQKAF 71
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 20.2 bits (40), Expect = 8.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 120 WGGVGNWVLIHQRLCGSKRKNSS 52
WGG+G VL L G+ SS
Sbjct: 563 WGGIGVVVLFAVVLAGATCLGSS 585
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 20.2 bits (40), Expect = 8.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 228 LIDNQKAILNAIEFRLCDTV 287
+++NQ A+ N LCD V
Sbjct: 117 IVENQYAVENNTGSSLCDLV 136
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,310
Number of Sequences: 438
Number of extensions: 995
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9638226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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