Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_L02
(829 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24) 63 2e-10
SB_17048| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_8638| Best HMM Match : PP2C (HMM E-Value=6.5e-32) 54 1e-07
SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09) 36 3e-06
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 46 4e-05
SB_45543| Best HMM Match : PP2C (HMM E-Value=6.00036e-42) 36 0.030
SB_15443| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_57481| Best HMM Match : PP2C (HMM E-Value=2.9e-32) 31 0.86
SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_43723| Best HMM Match : PilP (HMM E-Value=7.4) 31 1.5
SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_8664| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 29 4.6
SB_13499| Best HMM Match : PP2C (HMM E-Value=1.8e-06) 28 8.0
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24)
Length = 316
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 651 MSELPELSNGKEKSGSTAVCAFVSPEQIYIANCGDSRAVLARGGIPIFATRXHKPELP 824
M +LP+ S+G++KSGSTA+ V+P+ ANCGDSR +L+ G I+ T HKP P
Sbjct: 1 MQKLPKWSSGEDKSGSTAIALLVTPKYYIFANCGDSRGILSHNGEVIYNTVDHKPGNP 58
>SB_17048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 54.8 bits (126), Expect = 8e-08
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Frame = +3
Query: 411 GVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQTEE 590
G S+QG + ED L L+ D+ YFAVFDGH G + + L E + +
Sbjct: 92 GFNSLQGKKFVNEDRFKL-LELD---PDFYYFAVFDGHGGVSSAEFAHDKLHEIVRRMHR 147
Query: 591 FRREDIAEAIRTGFLDLDKKMS-ELPELSNGKEK------SGSTAVCAFV-SPEQIYIAN 746
D+ + + F + D ++ L L + K + SG+TA + + IA+
Sbjct: 148 DGENDLEKILVQAFEECDTELKRHLEHLVSEKGEDLSELSSGTTATVVLLRDGTDLAIAS 207
Query: 747 CGDSRAVLARGGIPIFATRXHKPEL 821
GDSRAVL R G TR H P L
Sbjct: 208 TGDSRAVLCRNGETSCITRDHHPSL 232
>SB_8638| Best HMM Match : PP2C (HMM E-Value=6.5e-32)
Length = 905
Score = 54.0 bits (124), Expect = 1e-07
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Frame = +3
Query: 363 ETKKYNESGEGN----GLRYGVASMQG--WRVEMEDAH-HAQLTLNGTLSDWSYFAVFDG 521
+ K+Y+ G+ L +G+ + W+ MED H N S +FAVFDG
Sbjct: 521 DPKEYHVMGQSTLLNCALAFGICEDKNSRWKTTMEDRHTFCDYFCNDPQS--GFFAVFDG 578
Query: 522 HAGARVSAHCAENLLECILQ-TEEFRREDIAE---------AIRTGFLDLDKKMSELPEL 671
+ GA + A+ E + + E R +A A+R + D+D+ + +
Sbjct: 579 YNGATAAGTSAKTFPEVLARKVESVYRPGLASEGVDAKITTALRETYEDVDRILLYGVDE 638
Query: 672 SNGKEKSGSTAVCAFVSPEQIYIANCGDSRAVLARG-GIPIFATRXHKP 815
+ SG +AV + ++YIAN G+ RAVL +G G I T+ H P
Sbjct: 639 DSRNRWSGCSAVTCLLRGNKLYIANAGNVRAVLCKGDGSMIRLTQEHTP 687
>SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)
Length = 1338
Score = 35.9 bits (79), Expect(2) = 3e-06
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 645 KKMSELPELSNGKEKSGSTAVCAFVSPEQIYIANCGDSRAVLAR 776
+++ EL E +G G+TAV A + ++Y+AN GDSRA+L +
Sbjct: 200 ERIQELQEHISG----GTTAVVALIFNNKLYVANAGDSRALLCK 239
Score = 33.1 bits (72), Expect(2) = 3e-06
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +3
Query: 504 FAVFDGHAGARVSAHCAENL-LECILQ--TEEFRREDIAEAIRTGFLDLDK 647
+ VFDGH GA V+ A+ L E +LQ T++ E++ +R F ++K
Sbjct: 112 YGVFDGHDGASVADFAAQRLPAELLLQQLTDDMTDEEVQLVLRQAFFAVEK 162
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 690 SGSTAVCAFVSPEQIYIANCGDSRAVLARGGIPIFATRXHKPE 818
SG+TA+ A V + +AN GDSR VL R GI + + HKPE
Sbjct: 267 SGTTAIVALVKDNNLTVANVGDSRCVLCRNGIALDMSIDHKPE 309
>SB_45543| Best HMM Match : PP2C (HMM E-Value=6.00036e-42)
Length = 375
Score = 36.3 bits (80), Expect = 0.030
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
Frame = +3
Query: 414 VASMQGWRVEMEDAHHAQLTLNGTLS------DWSYFAVFDGHAGARVSAHCAENLLECI 575
V +++ R +MED H N +++YFAVFDGH G + A + L C
Sbjct: 43 VYAIKNTRRKMEDKHVIMPHFNSLFGLPKDSPNYAYFAVFDGHGGIDAATFAATH-LHCF 101
Query: 576 LQTEEFRREDIAEAIRTGFLDLD-----KKMSELPELSNGKEKSGSTAVCAFVSPEQIYI 740
L E +D A+ F + D + +SE+ + K+ TA C VS +
Sbjct: 102 LAQNEHLIKDPGLALHETFQNTDCSFGARAISEVNYILLCKD----TASCYSVSSKTANS 157
Query: 741 ANCGDSRAVLARGGIPIF 794
N + + GG ++
Sbjct: 158 GNIDEKDRIEGLGGCVVW 175
>SB_15443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 35.9 bits (79), Expect = 0.040
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Frame = +3
Query: 402 LRYGVASMQGWRVEMEDAHHAQLTLNGTLSD--WSYFAVFDGHAGARVSAHCAENLLECI 575
LR + QG R MED D ++ AVFDGH G + L E I
Sbjct: 20 LRVSSEAHQGGRKCMEDFTSILFDRQHIGKDIGQAFIAVFDGHGGREAAVFARSRLWETI 79
Query: 576 LQTEEFRRED---IAEAIRTGFLDLDKKMSEL--PELSNGKE 686
+ F D + +AI+ GF+ + M ++ PE+ G E
Sbjct: 80 KKQRGFYSSDPEHVVKAIKEGFMATHRSMWKVLGPEMIPGPE 121
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 498 SYFAVFDGHAGARVSAHCAENLLECI 575
+Y+AVFDGHAG R S AE+L E I
Sbjct: 454 AYYAVFDGHAGPRASLFAAEHLHENI 479
>SB_57481| Best HMM Match : PP2C (HMM E-Value=2.9e-32)
Length = 435
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = +3
Query: 654 SELPELSN----GKEKSGSTAVCAFVSPEQIYIANCGDSRAVLARGG 782
S+LPE S+ +G+ A+ A++ ++++AN GD RAVL G
Sbjct: 175 SKLPEGSSCHAFDAANAGACALVAYIQGTELFLANAGDCRAVLGVQG 221
>SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1144
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 589 SSVCRIHSRRFSAQCAETRAPA--CPSNTAKYDQSESV 482
S+ C+ H+RRFS C APA S+ AKY S S+
Sbjct: 204 STSCQEHARRFSVLCGPLGAPAKYAGSSNAKYAGSSSM 241
>SB_43723| Best HMM Match : PilP (HMM E-Value=7.4)
Length = 267
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 636 DLDKKMSELPELSNGKEKSGSTAVCAFVSPEQIYIANCGDSRAVLARGG 782
D K+M+ + E KEK G+ VC + QI +A + +A +GG
Sbjct: 197 DGQKEMAGMNEEKANKEKGGNLLVCLVLGDGQIDMAGMNEEKANKDKGG 245
>SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 137
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 70 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 120
>SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 99 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 149
>SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 122 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 172
>SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 303
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 236 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 286
>SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 269
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 202 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 252
>SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 70 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 120
>SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 122 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 172
>SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 404
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 337 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 387
>SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 299
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 232 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 282
>SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 291 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 341
>SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 99 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 149
>SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 99 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 149
>SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 99 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 149
>SB_8664| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 73
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 6 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 56
>SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 328
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 801 VWQKSGYRRGPVQRENRRSSRCISVREKRK--HTRPSNQTSLYRWTAREARSF 649
+W+ +G + EN+RS+ + R+KRK +P+N T Y W R F
Sbjct: 261 IWRNL-IHKGAIHSENKRSNAAKNKRQKRKARADQPTNMTPSY-WCPTCGRGF 311
>SB_13499| Best HMM Match : PP2C (HMM E-Value=1.8e-06)
Length = 177
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +3
Query: 690 SGSTAVCAFVSPEQIYIANCGDSRAVLAR---GGIPIFA---TRXHKPELP 824
SG+T + ++++A+ GDS AVLA G + A T HKPE P
Sbjct: 14 SGTTVTVIIIRGHKMFVAHVGDSGAVLASKEPGTKRLEAYPLTDDHKPEAP 64
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 600 EDIAEAIRTGFLDLDKKMSELPELSNGKE 686
EDI E I +DL KK SE+ E+++ KE
Sbjct: 235 EDINEKITALRIDLTKKESEIAEMAHDKE 263
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,947,939
Number of Sequences: 59808
Number of extensions: 469031
Number of successful extensions: 1298
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -