Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_K21
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   1.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   1.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   1.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   1.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   1.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   1.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   1.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   1.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   6.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.5  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 586 PQVCPHLPQNPY 551
           PQV P  PQ+PY
Sbjct: 46  PQVAPQYPQHPY 57


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +1

Query: 346 KKRKGANLSRRTI-HARAMHDIRARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQ 522
           K R+ A  S   I H R M ++R R+ ++ + E  A  R  +  +   +L + +  +   
Sbjct: 82  KSRRKAPQSFEDIQHQRVMANVRERQRTQSLNEAFASLRKSIPTMPSDKLSKIQTLKLAA 141

Query: 523 RQLE 534
           R ++
Sbjct: 142 RYID 145


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -1

Query: 342 HCFHNNKIGIFINHVYVFVLI*NNSQKNLSTI*VYTGTVMAVVGV 208
           +C   +K+ I +N +   VL+    Q NLS      G    V+G+
Sbjct: 565 NCMCTHKVDIPLNAIVEIVLVDEVQQPNLSHPFHLHGYAFNVIGI 609


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 638 YNKQN*VDSVLQVL*TSSAGLSPFTPESLFIP 543
           YN +     VLQ   ++S+   P +PESLF P
Sbjct: 272 YNFRVPQHQVLQSPSSTSSSPEPRSPESLFKP 303


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 607 YRYFEHLPQVCPHLP 563
           YR F H P+   HLP
Sbjct: 693 YRPFSHFPRCGNHLP 707


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
 Frame = -2

Query: 773 FXKFLSCFKMHFSTTIFNLF*RIFGE------LIFSVSIVSLIFL 657
           F   +S   +HF   I +LF   F +      LI ++S+VSLIFL
Sbjct: 204 FLLIISYSTLHFVNYIDDLFFFRFEKSKFEPFLISNISLVSLIFL 248


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 93  IINMRVAQKN*TNTLTVTATIDTQIKP 13
           ++N  V  ++    LTVTA +  +I+P
Sbjct: 308 VVNNSVGGESVETVLTVTAPLKAKIEP 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,466
Number of Sequences: 336
Number of extensions: 3176
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)