BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_K21
(789 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.61
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 1.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 1.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 1.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 1.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 1.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 1.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 1.4
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 4.3
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 22 5.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 5.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 7.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 7.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 7.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 7.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 7.5
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.4 bits (53), Expect = 0.61
Identities = 18/97 (18%), Positives = 40/97 (41%)
Frame = +1
Query: 283 QNENVYVVNKYTYFIIVKAMPKKRKGANLSRRTIHARAMHDIRARRSSEQIQENNADSRV 462
Q + +N Y + A+P +K A + I + + ++ +Q Q+
Sbjct: 1460 QQQQQQQLNHYPDLHNLYAVPTDKKSA-CDSKLIVDHSSQKTQQQQPQQQQQQQQQQQPQ 1518
Query: 463 RMSQLRKSRLQEARDERNQQRQLEPSNGINRDSGVNG 573
+ SQ + + + + ++ QQ+Q +P V+G
Sbjct: 1519 QQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSG 1555
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 79
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD R ++R EP
Sbjct: 260 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRRERERSKEP 301
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 457 ANLHCFLEFVRLIFVLLYHA 398
AN+ +L F+R++ V+L A
Sbjct: 46 ANIPTWLSFIRIVLVILLRA 65
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 413 HEDQANKFKKTMQIRV 460
H DQA ++KK QI +
Sbjct: 252 HADQAEEYKKIQQILI 267
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVR-MSQLRKSRLQEARDERNQQRQLEP 537
R R S + +E N+ R + R++ + +RD ++R EP
Sbjct: 35 RKRNSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREP 78
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVR-MSQLRKSRLQEARDERNQQRQLEP 537
R R S + +E N+ R + R++ + +RD ++R EP
Sbjct: 35 RKRNSRSREREQNSYKNEREYRKYRETSKERSRDRAERERSREP 78
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ ++N+ + + R++ + +RD ++R EP
Sbjct: 38 RYSRSRER-EQNSYKNEKEYRKYRETSKERSRDRTERERSREP 79
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 93 IINMRVAQKN*TNTLTVTATIDTQIKP 13
I+N V ++ LTVTA + +I+P
Sbjct: 288 IVNNSVGGESVETVLTVTAPLGAEIEP 314
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRTERERSREP 79
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRTERERSREP 79
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRTERERSREP 79
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRTERERSREP 79
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 7.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 409 RARRSSEQIQENNADSRVRMSQLRKSRLQEARDERNQQRQLEP 537
R RS E+ Q + + R + R++ + +RD ++R EP
Sbjct: 38 RYSRSREREQNSYKNER-EYRKYRETSKERSRDRTERERSREP 79
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,148
Number of Sequences: 438
Number of extensions: 3727
Number of successful extensions: 25
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -