Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_K18
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z82086-5|CAB04992.2|  325|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AL117195-18|CAB55029.1|  490|Caenorhabditis elegans Hypothetical...    29   4.8  
Z70780-11|CAC35815.1|  138|Caenorhabditis elegans Hypothetical p...    28   8.5  

>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 630 SRKCLCHYF--TCEWTADAASGRCRRPPWSLYHPSGSHSLCRYR 505
           +R+ LCH F  TC   A +      R P + Y PS S+S   YR
Sbjct: 12  AREVLCHTFGITCATGAGSEIALVARDPTTYYRPSSSNSDPTYR 55


>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 630 SRKCLCHYF--TCEWTADAASGRCRRPPWSLYHPSGSHSLCRYR 505
           +R+ LCH F  TC   A +      R P + Y PS S+S   YR
Sbjct: 12  AREVLCHTFGITCATGAGSEIALVARDPTTYYRPSSSNSDPTYR 55


>Z82086-5|CAB04992.2|  325|Caenorhabditis elegans Hypothetical
           protein ZK228.5 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 305 CSGIFLARHVHFGCQN*RLPFVWCVFTVSPLPSTVLLLYDDRY 177
           CSG FL   +  G  +  + + W +  V  L  T+L+ ++DRY
Sbjct: 78  CSGYFLGVTLWLGLPSDVMSY-WDISLVGVLSVTILMFFEDRY 119


>AL117195-18|CAB55029.1|  490|Caenorhabditis elegans Hypothetical
           protein Y57A10A.25 protein.
          Length = 490

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 155 GAPRHHLPLPLYSPLCGYFTNNTYGHVQNNPR 60
           G P H +P+ L+  +C YF  + + H +N  +
Sbjct: 287 GFPDHAIPIDLHIHVCKYFAYHGFCHARNTEK 318


>Z70780-11|CAC35815.1|  138|Caenorhabditis elegans Hypothetical
           protein F46B6.12 protein.
          Length = 138

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 222 NSKNTPDEWETLILTSKMDVAGEKNAATAHKFREIC 329
           N    PD W+ ++L   +DV G +  A   +  ++C
Sbjct: 7   NCGEAPDHWQYVVLNEMLDVPGSRGEANLVEKCKLC 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,314,604
Number of Sequences: 27780
Number of extensions: 415150
Number of successful extensions: 951
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)