Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_K17
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015504-1|AAH15504.1| 301|Homo sapiens SCO cytochrome oxidase ... 225 1e-58
AF295386-1|AAG23836.1| 301|Homo sapiens cytochrome oxidase defi... 225 1e-58
AF183424-1|AAG09693.1| 301|Homo sapiens SCO1/2 protein protein. 225 1e-58
AF026852-1|AAD08641.1| 301|Homo sapiens h-sco1 protein. 225 1e-58
AF131816-1|AAD20051.1| 190|Homo sapiens h-sco1 protein. 202 2e-51
CR456569-1|CAG30455.1| 266|Homo sapiens SCO2 protein. 185 2e-46
BC102025-1|AAI02026.1| 266|Homo sapiens SCO cytochrome oxidase ... 185 2e-46
BC102024-1|AAI02025.1| 266|Homo sapiens cytochrome oxidase defi... 185 2e-46
AL021683-1|CAA16671.1| 266|Homo sapiens protein ( Homo sapiens ... 185 2e-46
AF177385-1|AAF05313.1| 266|Homo sapiens cytochrome c oxidase as... 185 2e-46
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 34 0.69
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 34 0.69
AK002043-1|BAA92051.1| 122|Homo sapiens protein ( Homo sapiens ... 31 3.7
>BC015504-1|AAH15504.1| 301|Homo sapiens SCO cytochrome oxidase
deficient homolog 1 (yeast) protein.
Length = 301
Score = 225 bits (551), Expect = 1e-58
Identities = 95/175 (54%), Positives = 129/175 (73%)
Frame = +3
Query: 282 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 461
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 462 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 641
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 642 LVGKYCKEFTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
+ Y KEF+P+L+GLTGT+E+V Q ++Y VY+ GP+ D DYIVDHTII+YL
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYL 266
>AF295386-1|AAG23836.1| 301|Homo sapiens cytochrome oxidase
deficient in yeast homolog 1 protein.
Length = 301
Score = 225 bits (551), Expect = 1e-58
Identities = 95/175 (54%), Positives = 129/175 (73%)
Frame = +3
Query: 282 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 461
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 462 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 641
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 642 LVGKYCKEFTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
+ Y KEF+P+L+GLTGT+E+V Q ++Y VY+ GP+ D DYIVDHTII+YL
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYL 266
>AF183424-1|AAG09693.1| 301|Homo sapiens SCO1/2 protein protein.
Length = 301
Score = 225 bits (551), Expect = 1e-58
Identities = 95/175 (54%), Positives = 129/175 (73%)
Frame = +3
Query: 282 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 461
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 462 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 641
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 642 LVGKYCKEFTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
+ Y KEF+P+L+GLTGT+E+V Q ++Y VY+ GP+ D DYIVDHTII+YL
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYL 266
>AF026852-1|AAD08641.1| 301|Homo sapiens h-sco1 protein.
Length = 301
Score = 225 bits (551), Expect = 1e-58
Identities = 95/175 (54%), Positives = 129/175 (73%)
Frame = +3
Query: 282 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 461
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 462 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 641
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 642 LVGKYCKEFTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
+ Y KEF+P+L+GLTGT+E+V Q ++Y VY+ GP+ D DYIVDHTII+YL
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYL 266
>AF131816-1|AAD20051.1| 190|Homo sapiens h-sco1 protein.
Length = 190
Score = 202 bits (492), Expect = 2e-51
Identities = 85/155 (54%), Positives = 115/155 (74%)
Frame = +3
Query: 342 MMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPD 521
M +VKKEK E L++ER++ +GK +GG F L G+ D+LG+W+LIYFGFTHCPD
Sbjct: 1 MKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPD 60
Query: 522 ICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTK 701
+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E + Y KEF+P+L+GLTGT+
Sbjct: 61 VCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTR 120
Query: 702 EQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
E+V Q ++Y VY+ GP+ D DYIVDHTII+YL
Sbjct: 121 EEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYL 155
>CR456569-1|CAG30455.1| 266|Homo sapiens SCO2 protein.
Length = 266
Score = 185 bits (450), Expect = 2e-46
Identities = 85/167 (50%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
Frame = +3
Query: 309 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 485
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 486 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 665
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 666 FTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
F PRLLGLTG+ +QV QA SY VY+ AGP+ D DYIVDH+I +YL
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYL 230
>BC102025-1|AAI02026.1| 266|Homo sapiens SCO cytochrome oxidase
deficient homolog 2 (yeast) protein.
Length = 266
Score = 185 bits (450), Expect = 2e-46
Identities = 85/167 (50%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
Frame = +3
Query: 309 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 485
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 486 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 665
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 666 FTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
F PRLLGLTG+ +QV QA SY VY+ AGP+ D DYIVDH+I +YL
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYL 230
>BC102024-1|AAI02025.1| 266|Homo sapiens cytochrome oxidase
deficient homolog 2 protein.
Length = 266
Score = 185 bits (450), Expect = 2e-46
Identities = 85/167 (50%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
Frame = +3
Query: 309 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 485
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 486 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 665
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 666 FTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
F PRLLGLTG+ +QV QA SY VY+ AGP+ D DYIVDH+I +YL
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYL 230
>AL021683-1|CAA16671.1| 266|Homo sapiens protein ( Homo sapiens
cDNA homologous to Yeast SCO1 & SCO2 genes and
C.elegans C01F1.2 gene. ).
Length = 266
Score = 185 bits (450), Expect = 2e-46
Identities = 85/167 (50%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
Frame = +3
Query: 309 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 485
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 486 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 665
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 666 FTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
F PRLLGLTG+ +QV QA SY VY+ AGP+ D DYIVDH+I +YL
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYL 230
>AF177385-1|AAF05313.1| 266|Homo sapiens cytochrome c oxidase
assembly protein isoform 2 protein.
Length = 266
Score = 185 bits (450), Expect = 2e-46
Identities = 85/167 (50%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
Frame = +3
Query: 309 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 485
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 486 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 665
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 666 FTPRLLGLTGTKEQVQQACKSYXVYFXAGPQXVDNDYIVDHTIIVYL 806
F PRLLGLTG+ +QV QA SY VY+ AGP+ D DYIVDH+I +YL
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYL 230
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 33.9 bits (74), Expect = 0.69
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +3
Query: 468 DFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELV 647
D L M + TH + PD +EKL V + D + L P S +RDTP V
Sbjct: 1208 DVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAASEKSERDTPAAV 1267
Query: 648 -----GKYCKE 665
GKY E
Sbjct: 1268 TAEGSGKYSGE 1278
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 33.9 bits (74), Expect = 0.69
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +3
Query: 468 DFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELV 647
D L M + TH + PD +EKL V + D + L P S +RDTP V
Sbjct: 1253 DVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAASEKSERDTPAAV 1312
Query: 648 -----GKYCKE 665
GKY E
Sbjct: 1313 TAEGSGKYSGE 1323
>AK002043-1|BAA92051.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ11181 fis, clone PLACE1007460. ).
Length = 122
Score = 31.5 bits (68), Expect = 3.7
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -2
Query: 490 NIHFPKKSAL-LTNLPSEFTSSKLPPIFAFPSCFFLSRSSASCFSFLTYIIKAVKPPPTT 314
++H+P AL +T+L S K P I +C F + C + + V PPP T
Sbjct: 14 DVHWPHGLALGITSLEVPVPSDKGPWIH-MTACLFFLETGPHCREVIVKVSNPVMPPPAT 72
Query: 313 TVAAIDFH 290
D H
Sbjct: 73 LTWERDTH 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,357,228
Number of Sequences: 237096
Number of extensions: 2387207
Number of successful extensions: 5541
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5536
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -