Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_K17
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    24   1.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   4.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   7.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   7.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   7.7  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
 Frame = -3

Query: 189 VAWNSFYYFNSFR--LPW 142
           +AW  FY+F S R  LPW
Sbjct: 81  LAWAIFYFFMSMRSELPW 98


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 260 KNSENAYADNMEVNGSNRCSWRRLDGFYDVCQKRKTG 370
           K  E A   N++V G+         G YD+  KR+ G
Sbjct: 295 KLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNKRRLG 331


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 689 NWNKGTSPASLQVLXSVLXCRAT 757
           NW+ GT    L V   VL C A+
Sbjct: 106 NWSFGTIMCDLWVSFDVLSCTAS 128


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 483 WMLIYFGFTHCPDICPDE 536
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 483 WMLIYFGFTHCPDICPDE 536
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 483 WMLIYFGFTHCPDICPDE 536
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,930
Number of Sequences: 438
Number of extensions: 4796
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)