Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_K14
         (389 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   1.3  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   3.0  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   3.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   9.1  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +3

Query: 39  GPSSFGQRRNHPHPLCSHLWXLVXSHSKIKMRPM 140
           G +    ++  PH +C  LW     +S  +++P+
Sbjct: 73  GENGVALKKGLPHVICCRLWRWPDLNSHTELKPL 106


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/45 (22%), Positives = 19/45 (42%)
 Frame = +3

Query: 6   SACQSLPTLPQGPSSFGQRRNHPHPLCSHLWXLVXSHSKIKMRPM 140
           S C ++P    G      R+  PH +   +W      S  +++P+
Sbjct: 76  SKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPI 120


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 297 SLLGRRWFPFFKTITEAP 244
           S  G+ W+  +K I EAP
Sbjct: 251 SFTGKMWYQVYKQIREAP 268


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 22   CQLCXRVPQASVSAXIIPIRYAVI 93
            CQLC  VP+ +  A     R+A +
Sbjct: 1004 CQLCVGVPETADDAFFECPRFAAV 1027


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,465
Number of Sequences: 2352
Number of extensions: 4656
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)