Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_K12
(391 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 129 2e-29
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 99 3e-20
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 99 3e-20
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 80 2e-14
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 77 2e-13
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 77 2e-13
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 73 3e-12
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 72 5e-12
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 71 1e-11
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 60 1e-08
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 58 8e-08
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 47 1e-04
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 45 5e-04
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 45 6e-04
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 44 0.001
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 44 0.001
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 38 0.069
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 0.64
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.0
UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1; Fl... 32 3.4
UniRef50_A7PQ24 Cluster: Chromosome chr18 scaffold_24, whole gen... 32 3.4
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 32 3.4
UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n... 32 4.5
UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316 ... 31 7.9
UniRef50_Q8B590 Cluster: Putative uncharacterized protein; n=1; ... 31 7.9
UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7; ... 31 7.9
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 129 bits (311), Expect = 2e-29
Identities = 64/95 (67%), Positives = 74/95 (77%)
Frame = +1
Query: 10 TNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 189
+ LRVAKVTGG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDLR KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 190 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 294
RAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 99.1 bits (236), Expect = 3e-20
Identities = 48/94 (51%), Positives = 63/94 (67%)
Frame = +1
Query: 10 TNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 189
+ LRV K+ G +SK ++ V K+IARV V + + LR YKNKKY PLDLR + T
Sbjct: 92 SQLRVQKIAAGASSKTQRIHDVRKSIARVLTVINANQRAQLRLFYKNKKYTPLDLRPRLT 151
Query: 190 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 291
RA+R+ LTKHEA +KT K+ +K+ FP R YAVK
Sbjct: 152 RALRRRLTKHEATLKTEKQRKKEIHFPQRKYAVK 185
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 99.1 bits (236), Expect = 3e-20
Identities = 51/93 (54%), Positives = 64/93 (68%)
Frame = +1
Query: 16 LRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 195
LRV+KVTGG ASKLSK+RVV K IAR+ V +Q K LR Y + KYKP+DLR KKTRA
Sbjct: 31 LRVSKVTGGAASKLSKIRVVRKNIARLLTVINQTQKQELRKFYADHKYKPIDLRLKKTRA 90
Query: 196 MRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 294
+R+ LT HE +++ K+ K R +AVKA
Sbjct: 91 IRRRLTAHELSLRSAKQQAKSRNQAVRKFAVKA 123
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 79.8 bits (188), Expect = 2e-14
Identities = 43/92 (46%), Positives = 56/92 (60%)
Frame = +1
Query: 19 RVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAM 198
RV+KVT SKLSK+ +V KA+A+V VY+Q+ K R YK PL+LR K TRA
Sbjct: 51 RVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLRPKLTRAK 110
Query: 199 RKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 294
RK LT + +KT KE ++ P R YA+ A
Sbjct: 111 RKGLTTKQLTMKTIKERKRAENLPKRKYALLA 142
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 76.6 bits (180), Expect = 2e-13
Identities = 41/94 (43%), Positives = 57/94 (60%)
Frame = +1
Query: 13 NLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 192
+LRV + TG +KLS++ VV K IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 193 AMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 294
A R+ALT +AK T K +K FP R +A+ A
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 76.6 bits (180), Expect = 2e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +1
Query: 13 NLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 192
NLRV KV GG +SK+ ++ + K IARV V +QK + NLR YK K PLDLRAKKTR
Sbjct: 103 NLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQKQRANLREFYKGKSQIPLDLRAKKTR 162
Query: 193 AMRKALTKHEAKIKTRK 243
A+R+ L + +++++
Sbjct: 163 AIRRKLNQQRFAMRSQR 179
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 72.5 bits (170), Expect = 3e-12
Identities = 40/93 (43%), Positives = 55/93 (59%)
Frame = +1
Query: 10 TNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 189
+ LR++K G A K SK+ V K +ARV VY+QK K+ LR YKNKK+KP +LR K T
Sbjct: 29 SGLRISKALGNSA-KNSKIHGVRKNVARVLTVYNQKRKMELRQLYKNKKFKPYNLRKKLT 87
Query: 190 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAV 288
+ R L+ + T ++ +K FP R Y V
Sbjct: 88 KNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYLV 120
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 71.7 bits (168), Expect = 5e-12
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Frame = +1
Query: 10 TNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYK---PLDLRA 180
+ LRV + TGG ++L ++R + K+IAR+ V +Q + NL+ Y ++K + P LR
Sbjct: 30 SQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQNERSNLKMFYADRKLRCKTPKVLRT 89
Query: 181 KKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 291
K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 90 KLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 70.5 bits (165), Expect = 1e-11
Identities = 35/92 (38%), Positives = 60/92 (65%)
Frame = +1
Query: 16 LRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 195
LR KV+ G A KL ++ +V K IA+ V +++ + +++N K+ P+DLR KKTRA
Sbjct: 33 LRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRA 92
Query: 196 MRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 291
+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 93 IRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 60.1 bits (139), Expect = 1e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +1
Query: 121 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 294
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 57.6 bits (133), Expect = 8e-08
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +1
Query: 13 NLRVAKVTGG-VASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 189
+LR K T G V ++++ RV K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 190 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 291
AMR LT+ + ++ K +++K FP YAVK
Sbjct: 118 HAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 47.2 bits (107), Expect = 1e-04
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 16 LRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRAKKT 189
LRVA+VTGG +KLS + K++ LR YK KK PLDLR KKT
Sbjct: 138 LRVARVTGGAPNKLSNI----------------KVRTALREAYKKKKKSLLPLDLRPKKT 181
Query: 190 RAMRKALTKHEAKI 231
A+R+ LTKH+ +
Sbjct: 182 CAIRRRLTKHQGML 195
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 45.2 bits (102), Expect = 5e-04
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 16 LRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRAKKT 189
LR K +G V + + ++ K +AR V +K+ L Y+ P +LR K
Sbjct: 30 LRQKKNSGDVGA--NDIKTAKKNLARALTVRREKILEELVEAYRGTPVSKLPKELRPKLN 87
Query: 190 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 285
R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 88 RSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 44.8 bits (101), Expect = 6e-04
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 16 LRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 195
L+ K A+KL++++ + +ARV + + L+ Y K P+DLR + ++
Sbjct: 31 LKGQKAASAAATKLTEIKNTRRDVARVKSILMVSQRKALQEKYAKAKLVPIDLRKHQEKS 90
Query: 196 MRKALT-KHEAKIKTRKEIRKKSLFPPRVYAVKA 294
+R L K+ K+ ++ R K LF R +A+KA
Sbjct: 91 LRNKLAPKYANKLTAQESRRHKCLF-ERKFALKA 123
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 44.0 bits (99), Expect = 0.001
Identities = 36/92 (39%), Positives = 40/92 (43%)
Frame = -3
Query: 293 ALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXF 114
AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 394 ALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCL 453
Query: 113 W*YTM*TRAIALLTTRSLDSLEATPPVTLATR 18
W T+ AIA T L SL PPVTLATR
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 160 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 279
KPLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 37.9 bits (84), Expect = 0.069
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 34 TGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 207
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 208 LTKHEAKIKTRKEIRKKS 261
+ K+E K K I+ S
Sbjct: 243 IAKYERYFKEAKNIKTLS 260
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 0.64
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 91 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 246
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.1 bits (72), Expect = 2.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 52 KLSKLRVVSKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAK 228
+L K + K + Y+ QK ++ R K NK+ K L + +K + K K + +
Sbjct: 110 QLKKKKKKKKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQ 169
Query: 229 IKTRKEIRKK 258
K RK+++KK
Sbjct: 170 RKQRKQLKKK 179
>UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Phage integrase
family protein - Flavobacterium johnsoniae UW101
Length = 386
Score = 32.3 bits (70), Expect = 3.4
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +1
Query: 76 SKAIAR-VYIVYHQKMKVNLRNHYKNKKYKPLDLRA-----KKTRAMRKALTKHEAK 228
S IAR + YH K+K L+N YK +K + D+ A K+ + R LT EAK
Sbjct: 167 SSTIARNTALSYHNKLKTTLKNAYKEQKLR-TDINAGIDSIKEQESQRNFLTLKEAK 222
>UniRef50_A7PQ24 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1724
Score = 32.3 bits (70), Expect = 3.4
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 1 PAXTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRA 180
P T LR+ ++G SKL K + S + R+Y V+ + RN++ + YK LD +
Sbjct: 806 PKLTLLRILTLSG--CSKLGKFQQNSGNLDRLYAVFLSFRGEDTRNNFTSHLYKALDQKG 863
Query: 181 KKT 189
+T
Sbjct: 864 IET 866
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 32.3 bits (70), Expect = 3.4
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 13 NLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 192
N+RV + V SK ++ +++K + Y ++ K+ +N Y+N+K K + KT+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 193 AMRKALTKHEAK 228
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S4 - Stigeoclonium helveticum (Green alga)
Length = 2922
Score = 31.9 bits (69), Expect = 4.5
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 43 VASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKAL-TKH 219
V S+L +L+ R Y++ QK+K+ + + YK LDL+ K + + KAL K+
Sbjct: 2235 VFSRLYELKKAKTITERKYVLIKQKLKIF--SLFSALNYKLLDLKEKGSISSSKALELKN 2292
Query: 220 EAKIKTRKEIRKKSLFPPRVYAVKA 294
+ K ++++K F ++KA
Sbjct: 2293 QIIQKISQKMKKVKTFAKFKQSLKA 2317
>UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316
protein; n=2; Danio rerio|Rep: PREDICTED: similar to
LOC553316 protein - Danio rerio
Length = 284
Score = 31.1 bits (67), Expect = 7.9
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 58 SKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKH-EAKIK 234
SK K +A+++ + +K+N HY + + KP+ R +K + + K EA+I
Sbjct: 170 SKAECDLKHVAKLFKSIDEMVKMNRGQHY-SSEIKPISQRQEKNERVTQGEPKRLEAQIN 228
Query: 235 TRKEIRKKS 261
K+I+ K+
Sbjct: 229 IDKDIKTKT 237
>UniRef50_Q8B590 Cluster: Putative uncharacterized protein; n=1;
Choristoneura fumiferana granulovirus|Rep: Putative
uncharacterized protein - Choristoneura fumiferana
granulovirus (CfGV)
Length = 365
Score = 31.1 bits (67), Expect = 7.9
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +1
Query: 13 NLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 192
N ++ K + K +KL+ + I + + ++K K N+ NK+++ + R K +
Sbjct: 259 NTKLEKDLDDIKEKNTKLKKENTTIKKTFRKIYRK-KYNI-----NKRFRQIKKRKYKLK 312
Query: 193 AMRKALTKHEAKIKTRK-EIRK-KSLFPPRVYAVK 291
+ L KH+ KI+ K +IRK K R Y +K
Sbjct: 313 KRFRRLRKHKNKIRKHKNKIRKRKYKLKKRKYKLK 347
>UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1729
Score = 31.1 bits (67), Expect = 7.9
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 97 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 243
Y++ ++ +K+ +R K+ K L + KK + M+K K+ +K+KT+K
Sbjct: 288 YLMKNKILKMKIRRKEIEKEKKLLRDQKKKKKNMKKKNGKNSSKVKTKK 336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,555,223
Number of Sequences: 1657284
Number of extensions: 3786916
Number of successful extensions: 15107
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15050
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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